| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2820 |
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| Symbol | |
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| ID | 3968223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3557492 |
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| End bp | 3558745 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921917 |
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| Product | hypothetical protein |
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| Protein accession | YP_528289 |
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| Protein GI | 90022462 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.172186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000164239 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAAAAGT TTTTAATTAC GCTTCACCGC TGGTTAGGCG TACCCCTTGG TTTGTTGTTT
ATTGTTACCT TTGGCACAGG CTGCCTAACG GCGGTAGATG AGTTATTGCA TCGCGTGGAC
CGACAGCAAT TAAGCGCTAA TTATGAATAC ACCCCAACAA CTATTGAACA AAATGCTGCA
GCGATAGAAA AAATCACTGC AGATAAACCT GGTATTCGCG CAGTTACACT GCCCACACCC
AGTAAGCCCT ATTATCAAGT AGTGGCGCGC GGTGAGACTT GGACTTACGC CATAAATGAT
CTAGACAATG CCGCCCACTA CCAAGAAGGC AACGATGGCT TTTTCCACAC GGTGCTCGAT
TTACATCGCC ATTTTTTACT AGGTAAAGAA GGCCTGTTTG GCGTGCAGGG TAAAGAATAT
GCCGCTTGGG TAGGCTTGCT AGCACTGCTG TTAAGTTCAC TTGGCCTATG GCTTTGGTGG
CCCTCGAAAA AAACATTTAA AGTAAAAGAC ATGTTACCGC GCGGTAAAAA ACGCAAACAC
TTTTACTACA GCCATATGAC CAGCGGGGTT GTTGTGCTCG CAGTAATCGT TCTGCTTGGC
CTAACCGGTG CATCTATTAC TTATCGCTCA ATAACCCAAC AACTGTTTGG CGTTGAACGC
AATAAAGCCT CTACCATGGC CCCTATCGTC GTGGCGCCCA CATGGCAGGC TTGGTTAACC
GCAGCGCAGA TTGCAATGCC TGAAGGCGCT CAACTAGATT CCGTGCGCTT TCCTCGTCAG
CCACGCAATA GTGGCGCCGA GCAGCGTAAT ACCAGCAAGC CCGCTAACAG CGAAAATACT
ACGCCGAACA ATAAAATGGG CAATAGAGCA AACAGCGCAG CTAATGAGGC TCGCAAAAAT
ACAAAAGGCG AAGCCGAGGA AAGCGCTGAG AAAATATTTG AGTTTAAATT TAACGCCGCA
GGCAACTGGT TTGGCATTGC ATCTAGCTCG GTAAAAATAG ACAAAACTAC ATCTGCCCTA
AAAGACGTAA ATCTATTTAG CCAACAAACG TTTGGCGAAA AATTCTACTC GATATTGGTG
CCACTACACA CTGGCAGGCA ACTACCTGCA GCATATGCAT TTGTATTGTT GGTATTTAGC
TTTTTTGGCA CAGTAATGGT GCTGTCTGGT TTGGTAAGCT TTGCAATAAA AAAGCGCAAA
TGGAAAAAGG CAAAGCGAGC TAACACGCTC GAAACAGAAC TAAGCCCTAG CTAA
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| Protein sequence | MKKFLITLHR WLGVPLGLLF IVTFGTGCLT AVDELLHRVD RQQLSANYEY TPTTIEQNAA
AIEKITADKP GIRAVTLPTP SKPYYQVVAR GETWTYAIND LDNAAHYQEG NDGFFHTVLD
LHRHFLLGKE GLFGVQGKEY AAWVGLLALL LSSLGLWLWW PSKKTFKVKD MLPRGKKRKH
FYYSHMTSGV VVLAVIVLLG LTGASITYRS ITQQLFGVER NKASTMAPIV VAPTWQAWLT
AAQIAMPEGA QLDSVRFPRQ PRNSGAEQRN TSKPANSENT TPNNKMGNRA NSAANEARKN
TKGEAEESAE KIFEFKFNAA GNWFGIASSS VKIDKTTSAL KDVNLFSQQT FGEKFYSILV
PLHTGRQLPA AYAFVLLVFS FFGTVMVLSG LVSFAIKKRK WKKAKRANTL ETELSPS
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