| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2810 |
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| Symbol | |
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| ID | 3968213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3546753 |
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| End bp | 3547319 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921907 |
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| Product | alkyl hydroperoxide reductase, C subunit |
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| Protein accession | YP_528279 |
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| Protein GI | 90022452 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0450] Peroxiredoxin |
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| TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000162826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCAAACTA TTATCAACAC TAAAATTCTT CCATTTAAAG CCACCGCTTT TTCTAAAGGC
GACTTTATTC CTGTAAGTGA ACAAGACCTA CTAGGTAAGT GGTCGGTAGT GATGTTCTAC
CCTGCGGACT TTACCTTTGT ATGCCCAACA GAGCTTGGCG ACATGGCAGA TCACTATGCG
CAATTACAAG AGATGGGCGT TGAGGTTTAC TCCGTATCTA CCGACACGCA CTTTACACAC
AAAGCTTGGC ACGACAGCTC GGACACCATA GGCAAAATTA ACTTTCCAAT GATTGGCGAC
CCAACCGGCA CCATTTCGCG CAACTTTGGG GTAATGATTG AAGAAGACGG CCTAGCACTG
CGCGGTACAT TCGTCATTAA CCCAGAAGGC GAAATTAAAG TAGCGGAAAT TCACGACCTA
GGTATTGGCC GCTCTGCGAA AGAATTGGTT CGTAAAATTC AAGCAGCACA ATACGTAGCT
GAGCACGACG GCGAAGTTTG CCCTGCCGCT TGGCAACCAG GTGAAGCAAC ACTTGCTCCT
TCTTTAGACC TTGTAGGCAA AATCTAA
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| Protein sequence | MQTIINTKIL PFKATAFSKG DFIPVSEQDL LGKWSVVMFY PADFTFVCPT ELGDMADHYA
QLQEMGVEVY SVSTDTHFTH KAWHDSSDTI GKINFPMIGD PTGTISRNFG VMIEEDGLAL
RGTFVINPEG EIKVAEIHDL GIGRSAKELV RKIQAAQYVA EHDGEVCPAA WQPGEATLAP
SLDLVGKI
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