| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2783 |
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| Symbol | |
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| ID | 3968340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3516054 |
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| End bp | 3517235 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921882 |
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| Product | ABC transporter, membrane spanning subunit, devC-like |
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| Protein accession | YP_528254 |
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| Protein GI | 90022427 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR01185] DevC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.301274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000609554 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCAGCG TAAAATGGCT AAGCAAGCTT CTAGGTAGAA TGCCGATCGG TTGGCTGCAG
CTAAGTCATT CTAAAGGGCG CATGTTTGCG GCTATCGCCG GCGTGGCGTT TGCAAATGTT
TTGGTATTTG TTCAATTGGG TATTCTAGGT GCGCTTAGCG GCACTATCAA TTTTTCATAT
AACCCTCTCA GCGCAGATAT ATTAGTCTCC TCATCGAATG CCAATACCCT CACAGATGGA
GTGCCATTGA GTCGCCGCTG GCTTTGGAAA GTGTTAGCAG TACCTGGCGT GTCCGCCGCG
TCGCCTCTCT ATTTAGGTAA GGTAGACTGG CTGCTGCCAA ATGAAAAAAC CGCGTCTTTA
ACCGTTTATG GCTTGCCTAT TGAGGCTACT GCGTTTTCAG GCAGCTTACT TAGCGACAAA
TTAAAAGCGA TTGCAATTCC GGGCACTGCT TTACTTGATC GTCGTACCCG AGGTTTAGAT
ACACAAACCA TTGACGCACT ATTCGGTAGT AAAAATGCCA CTATTGAACT GTCAGGCACC
AAAATTAATA TCGTCGGAGA TTTTGAATTA GGCGGTGGTT TTAGTGCAGA CGGTGCACTT
ATTGTTTCAG ATCAAACCTT TTTAACGTTG TTTCCAAATC GCAGCTCAGG CACACCGTCT
CATTTATTAG TCAATCTAGT TGATGGCACG CAGGTTGCGA CCATGGTTAA CAAACTCATG
GATATTTTCA GTAATGAACC GTTAAAAATC CGCAGTATGG CAAAGGCGCA AGCCGAAGAT
CTCGCTTATC AAACTACCCA GCGCCCGATA GGCGTTATCT TTGGCATGGG TGTTTTTATC
GGCATATTGG TGGGTTTAGT TATCGTCTAT CAAGTTCTGT CTACGGACGT GGCAGACCAT
TTGCGTGAGT ATGCAACGTT TAAAGCGATC GGTTATCGGC ACAGCTTCTT TTTAGGTATT
GTGTTTGAAG AGGCAATTAT TCTTGCCATC TTGGGGTTCA TTCCAGGTTT GAGTATTTCG
CTACTCATTT ATGAAGTGAT GTCCACAGCG ACGGGTTTAC CCGTGGCGAT GGATATTTCT
CGTGCAAGCT TGGTCTTTAT CGGCACCATC GCTGCCTGTA CATTGTCGGG AGCTTTTGCC
ACGCGGCGAC TAAAATCCGC CGACCCTGCG GAGCTTTTTT AA
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| Protein sequence | MLSVKWLSKL LGRMPIGWLQ LSHSKGRMFA AIAGVAFANV LVFVQLGILG ALSGTINFSY
NPLSADILVS SSNANTLTDG VPLSRRWLWK VLAVPGVSAA SPLYLGKVDW LLPNEKTASL
TVYGLPIEAT AFSGSLLSDK LKAIAIPGTA LLDRRTRGLD TQTIDALFGS KNATIELSGT
KINIVGDFEL GGGFSADGAL IVSDQTFLTL FPNRSSGTPS HLLVNLVDGT QVATMVNKLM
DIFSNEPLKI RSMAKAQAED LAYQTTQRPI GVIFGMGVFI GILVGLVIVY QVLSTDVADH
LREYATFKAI GYRHSFFLGI VFEEAIILAI LGFIPGLSIS LLIYEVMSTA TGLPVAMDIS
RASLVFIGTI AACTLSGAFA TRRLKSADPA ELF
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