| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2782 |
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| Symbol | |
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| ID | 3968339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3514849 |
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| End bp | 3516054 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921881 |
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| Product | multidrug resistance efflux pump-like |
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| Protein accession | YP_528253 |
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| Protein GI | 90022426 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR02971] ABC exporter membrane fusion protein, DevB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000623045 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGAAGA AAGCGAAAGA TAGAGCGGTA TCTGAAGAGA TAATGCCATT AATCGAAAAT
GGTATTGCGA AACATCTCGC GATAAAGCGT AACTGGCAAC CCGTGCGTCG TAAGTTTTTG
ATTCTATCCG TCGTTGTGGG GTTAATCGCA TTGGGCGGAA TTGTTGGCAT GTATTTTCAG
CCACCGGGAT TGCAGCTCTT CTTCAGGGCG ACAGGTCTTG TGCCCGGTGC TGGGTCAGAA
CACCCGATTG CGACGCCGGT TCAGCGGCAA GCATCACTGG CAACACAGCA GAATATGACG
ATTAAAGCGC TCGGGAGGTT GATGCCCTAT GGTGACGTCA TCGTGGTTGC TCCACCGTTC
GGCGCTGGTG ATGCGCGCAT CGCAAAAATT CTCGTTAAAG AGGGTCAAGT GGTAGACGCC
AACGATGTCA TCGCGCAACT GGATAGCCTA GATCAATTGC AATCCGCGGT TAATGTTGCA
GAAGCAGGTT TGGGTGTAGC GCTAGCAACA TTGAACCAAA TGGAAAGCCT TGTAGACACT
TCTCTAAAAG ATCTTTTTGC CAAGCACGAA GGCGCAGAGG AGTCTTTACA TGTTGCTTCA
CTAAACCACC AGCGCGTAGT CGATCTTTAT AAAAATTCAA TGGTGTCACT CAAAGAATTG
GAGCAAAGCG AATTAAGCGT AATTACAGCG AAAAAGTCAC TAGAACAAAT TGAGGCTCAA
TTGAGTCGCA CGGTTGGCGG CGAAAGCCAA ACAGATATTC AGCTTGCATT GTCTCAATTA
AAATTGGCAA GGGCTGATGT TGAGCGCGCA AAAATAGATC TTCAAAAAGC GTATATACGA
GCGCCGAAAC CCGGCACCAT AATCCGTTTA CATGTGCGTG TAGGCGAACG TCCTGGAAAT
TTGGGTGTTG CTACTCTCGG TGCCACTGAT TCGATGCAGG CTGAATTAGA AATCTATCAA
ACAGATATCG CTGATGTAGT GGTAGGCGCA AATGTGTTAC TTACTAGCCC AGCACTTAAA
ACACCGCTAC AAGGCAAGGT TTCTGAAGTT GGCTTGGAAG TTGAACGCCA GAGTATCGTG
GGCACGAGCC CTGCATCCAA TCTAGATGCA CGCATTATTA GAGTAACAGT CGATTTAGAT
GAGATGTCCT CGCAGCTCGC GAAGAGCTTA ACGGGTTTAG AAGTTACCGC CACGGTGGAC
ATCTAA
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| Protein sequence | MTKKAKDRAV SEEIMPLIEN GIAKHLAIKR NWQPVRRKFL ILSVVVGLIA LGGIVGMYFQ
PPGLQLFFRA TGLVPGAGSE HPIATPVQRQ ASLATQQNMT IKALGRLMPY GDVIVVAPPF
GAGDARIAKI LVKEGQVVDA NDVIAQLDSL DQLQSAVNVA EAGLGVALAT LNQMESLVDT
SLKDLFAKHE GAEESLHVAS LNHQRVVDLY KNSMVSLKEL EQSELSVITA KKSLEQIEAQ
LSRTVGGESQ TDIQLALSQL KLARADVERA KIDLQKAYIR APKPGTIIRL HVRVGERPGN
LGVATLGATD SMQAELEIYQ TDIADVVVGA NVLLTSPALK TPLQGKVSEV GLEVERQSIV
GTSPASNLDA RIIRVTVDLD EMSSQLAKSL TGLEVTATVD I
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