| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2773 |
|---|
| Symbol | |
|---|
| ID | 3968330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 3505203 |
|---|
| End bp | 3506153 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637921873 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_528245 |
|---|
| Protein GI | 90022418 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00461161 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGATTAACC GGAGAGTGTT GACCATGAAT ATTTTACTGC GGCAACCGCT GCCTATTTCA
GAAAAGGTCC TGACCTGGGG GCTGCTCCTG CTGAACGGAC TTTTGATTGC GCTGATGCTG
GCGCTAGCTA AAACGGCTAC CTCACAGGGC TTACCTGCAG CAAGCTATGC CTTCTGGCAG
ACGCTGATCG CAGGAACGCT CCTACTGGTA TTTTCAGGCG GCCAGAAGAA ACATTTCAGC
AGACAACTGA TGCCATATTT CTTGGTCAGT GGTCTGACGG GAATCGCGAT TCCCAATGTG
ATAGCCTTTT ATCTGGTGAC GCGTCTGGGG GCCGGATTTA CCGGCATCAT GTACGCGCTG
CCACCCCTGT TTACGTTTCT GTTGGCCTTG ACCTTGAGGC TCGAAAAGCT CGCATGGACC
CGGTTCGCCG GGCTTGGCAT GGCCGTGTTG GCCTGTTCCT GGATCGTGTC ACAACGGCAT
GAGGAAATGG GGTTGGTGAA TCCACTATGG TTCGGCTTGG GCCTGCTTAT TCCCTTCATG
CTCTCCATTG GAAACATCTA TCGCTCAATC GCCTGGCCCA AGGACGCAAA GCCTACCACC
CTGGCAGCCG GTACCTTGCT CACCAGCGCC TTGACGCTTG CTGTGTTTGC GCGGTCGACT
GGAACCGACC TATTGCCAGA CCTGCTTGAT TCAAACCTGT TCGCGATCCT GGCTTTGCAA
GGGGGGCTAA CGGCTTTAAC CTATTTATGT GCATTTGAAT TGCAAAAGCG ATCCAATCCG
GTTTTCTACA GTCAATTGGG AGTTGTCGCC GCGCTGTTTG GGTTGATGAT CGGTGCCCTG
TGGTTTAAAG AGTCCTATTC CTTCGGTATC TGGATCGGTG CATTGTTCGT TGTGCTCGGG
CTGAAACTGG GCGCACGTCG TGTCGAGAAT TCATGGCCCC AGCGCAGCTG A
|
|---|
| Protein sequence | MINRRVLTMN ILLRQPLPIS EKVLTWGLLL LNGLLIALML ALAKTATSQG LPAASYAFWQ
TLIAGTLLLV FSGGQKKHFS RQLMPYFLVS GLTGIAIPNV IAFYLVTRLG AGFTGIMYAL
PPLFTFLLAL TLRLEKLAWT RFAGLGMAVL ACSWIVSQRH EEMGLVNPLW FGLGLLIPFM
LSIGNIYRSI AWPKDAKPTT LAAGTLLTSA LTLAVFARST GTDLLPDLLD SNLFAILALQ
GGLTALTYLC AFELQKRSNP VFYSQLGVVA ALFGLMIGAL WFKESYSFGI WIGALFVVLG
LKLGARRVEN SWPQRS
|
|---|
| |