| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2770 |
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| Symbol | |
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| ID | 3968366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3503203 |
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| End bp | 3503787 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921870 |
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| Product | 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase |
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| Protein accession | YP_528242 |
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| Protein GI | 90022415 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00402973 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGATTGA ACATGAACCG CTTGATTCCA TTGATAAACC AAATTCGGCA GTGTCGCGAT
TGTGAACCCG AGTTACCATT GGGAGCTAGA CCCATCGTAC GTGGTGCTCC GAATGCAAAG
ATTTTAATTA TCGGCCAAGC CCCCGGCACC AAAGTGCATG CCAGTGGCAT TCCCTGGGAT
GATGCCAGTG GCAGACGTTT GCGCCAATGG ATGGGTATTG ATGATCAAGC GTTCTATGAT
GAATCGCGGA TCGCCATCAT GCCAATGGGT TTTTGTTATC CCGGCAAGGG TCGTTCGGGT
GACCTGCCGC CTCGTCCAGA GTGTGCGCCA AAATGGCACG CGCGTATGCT TGCATCACTG
CCGAATATTC AGCTTACTTT GTTGATTGGT CAGTACGCGC AGAAATATTA TCTAAAAGAA
GGCTTCACTA ACCTTACCGA CACGGTCAAA CATTGGGAAG ACTATTTACC ACACTACTTT
CCTCTGCCGC ACCCATCACC TCGCAATCAA ATTTGGCTTA AACAAAACCC CTGGTTTGAA
GAAATTGCGA TACCTGAATT ACAGCGCCGA ATTATTGCGT GCTAG
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| Protein sequence | MRLNMNRLIP LINQIRQCRD CEPELPLGAR PIVRGAPNAK ILIIGQAPGT KVHASGIPWD
DASGRRLRQW MGIDDQAFYD ESRIAIMPMG FCYPGKGRSG DLPPRPECAP KWHARMLASL
PNIQLTLLIG QYAQKYYLKE GFTNLTDTVK HWEDYLPHYF PLPHPSPRNQ IWLKQNPWFE
EIAIPELQRR IIAC
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