Gene Sde_2745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2745 
Symbol 
ID3968379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3474191 
End bp3474469 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content48% 
IMG OID637921845 
Productphage transcriptional regulator, AlpA 
Protein accessionYP_528217 
Protein GI90022390 
COG category[K] Transcription 
COG ID[COG3311] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATTT CTACCTTGAA AATCATTCGC CGTGAAGCGG TCCTTAATCG CTTTGGCAGA 
AGTAAAACAT GGCTAGCGGA CCAAGTCACC AGTGGGCTAG TCCCTCCACC CATTTCTCTA
GGTGGACGAG CTGTCGGATG GCTTGATCAC GAAATTAATG CCGTGATCGC CGCCAGATCC
GTTAACAAAC CTGACGAAGA GGTAAAAGAC CTAGTCTTAG CACTAATAGA ACAGCGCAGC
TTCACCGCCA ACCAAAGTTT AGAAGCTTTT GACTCTTGA
 
Protein sequence
MSISTLKIIR REAVLNRFGR SKTWLADQVT SGLVPPPISL GGRAVGWLDH EINAVIAARS 
VNKPDEEVKD LVLALIEQRS FTANQSLEAF DS