Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2743 |
Symbol | |
ID | 3968377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3472237 |
End bp | 3473490 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637921843 |
Product | phage integrase |
Protein accession | YP_528215 |
Protein GI | 90022388 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0469991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAGAA AGACAACTCC GCTTACAGCT ACACAAGTAT CTAACGCCAA ACCAAAGGAA AAGGTATACA GCCTATCCGA TGGCGGAGGC TTGCAGCTCG TAGTAAAACC GATAGGCTCC AAGCTTTGGC AATTTGATTA TTATCACCCT GCAACTAAAA AGCGCGCTCG CTTAAGCTTT GGCCCATACC CTGAAGTTTC ATTAGCTATA GCCCGAAAGC AACGGGAAGA ATGCCGCAAA CTTGTGCTCC AAGGCACAGA CCCAAAAGCA CATCGAGACA ACGAGAGATT ACAAGAACGA CTCGCTCACA CGGATACTCT TAAAGCGTCA GCCAAAGCTT GGTTTGAAAT TAAAAAAACG ACTATCACCC CCAATTATGC TGACGATATT TGGCGATCAC TTGAAAGGCA TATATTCCCA AAACTTGGCA GTGCACCTGT AAGCAAATTA ACCGCCCCCC AAATTATTGA AGTGTTAACC CCCATTGCCG CGAAAGGCAG CCTAGAAACA GTAAAACGGC TTTGCCAACG TTTAAACGAA ATCTTAATTT GGGCTGTAAA TACCGGTAAA TTACCTAGCA ACCCCATATC AGGTATTCGC TACAACTTCC AAGCGCCACA AAAAAAGAAT ATGCCAGCAT TAAGGCCAGA AGAACTTCCA GAGCTAATGC GCGCACTAAA CACAGCTAGC ATCAAACTAA CCACACGCTG TTTAATCGAA TGGCAACTTC ATACCCTAAC TCGCCCCTCA GAAGCAGCTG GCGCGGAGTG GAGCGAGATA GATGAAGTCC ATAAAATTTG GAGAATTCCC GCTATCCGTA TGAAAAAACG CAGAGACCAC GCTGTACCAC TCACACCCTC GATGCTAAAC CTACTCAACA TAATGCGCCC CATAAGCGGT GATAGCGAAT ATATATTCCC TGCGGACAGA AGCCCTCGCA AACACACTAA CGAACAAACA GCGAACATGG CATTAAAACG CATGGGCTTC AAAGACCGCC TTGTAGCACA CGGTCTACGC TCGATCGGCA GCACGGCTTT GAACGAGCAA GGATTTGAAT CAGATTTAAT TGAAGCTGCG TTAGCCCATG TAGACAAAGA CGATGTACGC GCTGCCTATA ACCGCGCAGA ATACATTGAG CGGCGCAGGC CAATGATGGA ATGGTGGAGC ACGTTAATCA TTAGCGCCTC GTCAGGAGGC ACCAGTCTCG CAAACGTCAC GAATATGACA CTGGGATGCA AGCATGTTAA ATGA
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Protein sequence | MPRKTTPLTA TQVSNAKPKE KVYSLSDGGG LQLVVKPIGS KLWQFDYYHP ATKKRARLSF GPYPEVSLAI ARKQREECRK LVLQGTDPKA HRDNERLQER LAHTDTLKAS AKAWFEIKKT TITPNYADDI WRSLERHIFP KLGSAPVSKL TAPQIIEVLT PIAAKGSLET VKRLCQRLNE ILIWAVNTGK LPSNPISGIR YNFQAPQKKN MPALRPEELP ELMRALNTAS IKLTTRCLIE WQLHTLTRPS EAAGAEWSEI DEVHKIWRIP AIRMKKRRDH AVPLTPSMLN LLNIMRPISG DSEYIFPADR SPRKHTNEQT ANMALKRMGF KDRLVAHGLR SIGSTALNEQ GFESDLIEAA LAHVDKDDVR AAYNRAEYIE RRRPMMEWWS TLIISASSGG TSLANVTNMT LGCKHVK
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