| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2741 |
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| Symbol | smpB |
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| ID | 3968374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3470304 |
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| End bp | 3470792 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921841 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_528213 |
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| Protein GI | 90022386 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00000520736 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCCCCA TGAGCAAAGC AAACAAAAAG AAAAAACCAC AAAGTAGCAC CATTGCCCAA
AACAAACGGG CAAGGCATGA CTATTTTCTA GAAACCAAAT TCGAGGCAGG CGTAGCCCTG
CTTGGCTGGG AAGTAAAAGC CTTGCGCGCG CAACGCGGCC AAATGACAGA AAGCTACGTA
CTGGTACAAA ATGGTGAAGC GTGGCTACAA GGGGCACAAA TTCAACCGCT GCCCCAAGCA
TGCACCCATT ACGTTACCGA GCCTGCGCGC CCGCGCAAAC TACTGCTTAA TCGCAGAGAG
CTAAACAAAA TAGCTGAAGC CAAAGATCAA AAAGGCTACA CCATTGTGGC AACCAGCCTT
TATTGGAAGG CCCATATGGT GAAGTGTGAA ATTGCTATCG CCAAAGGTAA GCAACTTCAC
GACAAACGCC AAACAGAAAA AGAACGCGAG TGGAACATCC AAAAGCAGCG CGTGCTATAC
GACAAATAA
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| Protein sequence | MRPMSKANKK KKPQSSTIAQ NKRARHDYFL ETKFEAGVAL LGWEVKALRA QRGQMTESYV
LVQNGEAWLQ GAQIQPLPQA CTHYVTEPAR PRKLLLNRRE LNKIAEAKDQ KGYTIVATSL
YWKAHMVKCE IAIAKGKQLH DKRQTEKERE WNIQKQRVLY DK
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