| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2739 |
|---|
| Symbol | |
|---|
| ID | 3968372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 3468320 |
|---|
| End bp | 3468751 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637921839 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_528211 |
|---|
| Protein GI | 90022384 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.000766301 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGAAAA TAGAGCGTAC CGCTTTGGTG GCATATTCCG CCGAGCAAAT GTTTAGTTTG
GTTAACGACA TAGAGTCATA CCCACAGTTT ATGGCCGGTT GTACTGGAGC TGAGGTGCTG
GCGCGTGGGG ATGGTTGGCT GGAGGCGCGT TTAGATTTAT CGCGCGCCGG GTTTAAGCAA
TCTTTTACAA CGCGCAATAC GCTTAAACCA CCGCATAGTA TGGATTTGCA GCTGGTAGCG
GGGCCTTTTT CTGCTTTTAA GGGGCGCTGG CAGTTTGATG CACTAAGCGA AAGCGCCTGT
AAAATTACCT TTAGTTTAGA ATATGAGTTT GCCAACAAGC TGCTGGCACT TGCTGCTGGC
AAGATATTTG AGCAAGTGGC GAGCGAGCAG GTAAGTACTT TGTGTGAGCG GGCACGACAA
GTATTTGTTT AG
|
|---|
| Protein sequence | MAKIERTALV AYSAEQMFSL VNDIESYPQF MAGCTGAEVL ARGDGWLEAR LDLSRAGFKQ
SFTTRNTLKP PHSMDLQLVA GPFSAFKGRW QFDALSESAC KITFSLEYEF ANKLLALAAG
KIFEQVASEQ VSTLCERARQ VFV
|
|---|
| |