| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2733 |
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| Symbol | dnaK |
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| ID | 3968422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3462095 |
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| End bp | 3464026 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921833 |
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| Product | molecular chaperone DnaK |
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| Protein accession | YP_528205 |
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| Protein GI | 90022378 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000184427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAAA TTATTGGTAT AGATTTGGGT ACAACTAACT CGTGTGTATC CATCTTAGAA
GGTAACAAAG CAAAAGTAAT TGAGAACTCT GAAGGTGACC GCACTACACC TTCTATTGTT
GCATTTACTG AAGACGGCGA AATTCTAGTA GGTCAGAGCG CTAAGCGTCA GGCTGTTACT
AACCCGCAAA ACACCTTGTT TGCCGTTAAG CGTTTGATCG GTCGTAAGTT TACCGACGAC
GTTGTACAAA AAGATATTTC CATGGTGCCG TACAAAATTA TCGCGGCAGA TAATGGCGAT
GCATGGGTAG AAGTGAAAGG CGACAAAAAA GCACCGCCTC AAATTTCTGC TGAAGTATTG
AAAAAAATGA AGAAAACCGC TGAAGATTAC TTGGGCGAAA CCGTTACCGA AGCGGTTATT
ACGGTACCTG CGTACTTCAA CGACTCTCAG CGTCAAGCAA CTAAAGACGC CGGTAAAATT
GCTGGTTTAG ACGTTAAGCG TATTATTAAC GAGCCTACAG CAGCGGCACT GGCTTACGGT
ATGGATAAAT CCAAAGGCGA CAGCACTATT GCTGTATACG ACCTAGGTGG TGGTACTTTC
GATATTTCTA TCATCGAAAT TGCCGATGTA GATGGCGAGC ACCAGTTCGA AGTACTTTCT
ACTAACGGTG ATACTTTCCT TGGTGGTGAA GATTTCGATT TGCGCTTAAT TGAATACTTG
GCAGAAGAGT TTAAGAAAAC AAACGGTATC GATTTACACA ACGATCCGCT TGCATTGCAA
CGCTTAAAAG AAGCGGCAGA GAAAGCCAAA ATCGAGCTTT CTTCTAGCCA GCAAACAGAA
GTTAACTTGC CATACATTAC TGCCGATGCC ACTGGCCCTA AACACTTAGT AGTGAAGCTT
TCGCGCGCTA AGTTAGAGTC TTTGGTTGAA GAGCTTGTAA ACCGTTCTTT AGAGCCGTTA
AAAATGGCTA TTAAAGACGC TGGCGTTTCT GTAAGCGACA TCGACGACGT AATTTTGGTG
GGTGGTCAAA CCCGTATGCC AATGGTGCAG GCTGCTGTTG CCAAGTTCTT TGGTAAAGAG
CCACGTAAAG ATGTAAACCC AGATGAAGCA GTAGCAATGG GTGCAGCTAT TCAAGGTGCG
GTACTTTCTG GTGACGTTAA AGACGTATTG TTGCTAGACG TAACCCCATT AAGCTTGGGT
ATCGAAACCA TGGGCGGTGT AGCAACGCCA TTAATCGAGA AGAATACGAC TATCCCGACT
AAAAAGTCGC AAGTATTCTC TACTGCAGAC GACAACCAAA CAGCTGTAAC TATTCACGTA
GTACAGGGTG AGCGTAAGCA AGCGTCGCAG AATAAATCGT TAGGTCGTTT CGACTTGGCG
GACATTCCTC CTGCACCACG CGGCATGCCA CAAATCGAAG TTACTTTCGA TATTGATGCC
AACGGTATCT TGAATGTGTC TGCTAAAGAT AAGGCTACAG GTAAAGAGCA ATCTATCGTT
ATTAAGGCTT CTTCTGGCTT AAGCGATGAT GAAATCGAAA AAATGGTGCA GGACGCAGAA
GCTAACGCCG ATGCGGACCG CAAGTTCGAA GAAGTTGTGA CTGCGAGAAA CACGCTGGAA
GGGCTTATTC ATGCAACCAA GAAAACGCTT GAAGAGGCGG GTGATAAGGC GACGGCAGAC
GAAAAATCTG CAATCGAAAG CGCAATTGCA GAAGCCGAAG AAGCAGCTAA AGGCGAAGAT
AAAGATGCGA TGGAAGCGGC TACTAAAAAG CTAACTGAAG CATCTAGCTC TCTTGCTCAA
AAACTGTATG CAGAGCAAGG CGCTGCGGGT GCAGGTGCAG CAGGCGCTGC TGATGCCGCC
GCAGATCAGC CAGCAGACGA TGGCGCAGTT GACGCTGAGT TTGAAGAAGT AAAAGAAGAC
GACGGCAAGT AA
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| Protein sequence | MGKIIGIDLG TTNSCVSILE GNKAKVIENS EGDRTTPSIV AFTEDGEILV GQSAKRQAVT
NPQNTLFAVK RLIGRKFTDD VVQKDISMVP YKIIAADNGD AWVEVKGDKK APPQISAEVL
KKMKKTAEDY LGETVTEAVI TVPAYFNDSQ RQATKDAGKI AGLDVKRIIN EPTAAALAYG
MDKSKGDSTI AVYDLGGGTF DISIIEIADV DGEHQFEVLS TNGDTFLGGE DFDLRLIEYL
AEEFKKTNGI DLHNDPLALQ RLKEAAEKAK IELSSSQQTE VNLPYITADA TGPKHLVVKL
SRAKLESLVE ELVNRSLEPL KMAIKDAGVS VSDIDDVILV GGQTRMPMVQ AAVAKFFGKE
PRKDVNPDEA VAMGAAIQGA VLSGDVKDVL LLDVTPLSLG IETMGGVATP LIEKNTTIPT
KKSQVFSTAD DNQTAVTIHV VQGERKQASQ NKSLGRFDLA DIPPAPRGMP QIEVTFDIDA
NGILNVSAKD KATGKEQSIV IKASSGLSDD EIEKMVQDAE ANADADRKFE EVVTARNTLE
GLIHATKKTL EEAGDKATAD EKSAIESAIA EAEEAAKGED KDAMEAATKK LTEASSSLAQ
KLYAEQGAAG AGAAGAADAA ADQPADDGAV DAEFEEVKED DGK
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