Gene Sde_2733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2733 
SymboldnaK 
ID3968422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3462095 
End bp3464026 
Gene Length1932 bp 
Protein Length643 aa 
Translation table11 
GC content46% 
IMG OID637921833 
Productmolecular chaperone DnaK 
Protein accessionYP_528205 
Protein GI90022378 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID[TIGR02350] chaperone protein DnaK 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000184427 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAAA TTATTGGTAT AGATTTGGGT ACAACTAACT CGTGTGTATC CATCTTAGAA 
GGTAACAAAG CAAAAGTAAT TGAGAACTCT GAAGGTGACC GCACTACACC TTCTATTGTT
GCATTTACTG AAGACGGCGA AATTCTAGTA GGTCAGAGCG CTAAGCGTCA GGCTGTTACT
AACCCGCAAA ACACCTTGTT TGCCGTTAAG CGTTTGATCG GTCGTAAGTT TACCGACGAC
GTTGTACAAA AAGATATTTC CATGGTGCCG TACAAAATTA TCGCGGCAGA TAATGGCGAT
GCATGGGTAG AAGTGAAAGG CGACAAAAAA GCACCGCCTC AAATTTCTGC TGAAGTATTG
AAAAAAATGA AGAAAACCGC TGAAGATTAC TTGGGCGAAA CCGTTACCGA AGCGGTTATT
ACGGTACCTG CGTACTTCAA CGACTCTCAG CGTCAAGCAA CTAAAGACGC CGGTAAAATT
GCTGGTTTAG ACGTTAAGCG TATTATTAAC GAGCCTACAG CAGCGGCACT GGCTTACGGT
ATGGATAAAT CCAAAGGCGA CAGCACTATT GCTGTATACG ACCTAGGTGG TGGTACTTTC
GATATTTCTA TCATCGAAAT TGCCGATGTA GATGGCGAGC ACCAGTTCGA AGTACTTTCT
ACTAACGGTG ATACTTTCCT TGGTGGTGAA GATTTCGATT TGCGCTTAAT TGAATACTTG
GCAGAAGAGT TTAAGAAAAC AAACGGTATC GATTTACACA ACGATCCGCT TGCATTGCAA
CGCTTAAAAG AAGCGGCAGA GAAAGCCAAA ATCGAGCTTT CTTCTAGCCA GCAAACAGAA
GTTAACTTGC CATACATTAC TGCCGATGCC ACTGGCCCTA AACACTTAGT AGTGAAGCTT
TCGCGCGCTA AGTTAGAGTC TTTGGTTGAA GAGCTTGTAA ACCGTTCTTT AGAGCCGTTA
AAAATGGCTA TTAAAGACGC TGGCGTTTCT GTAAGCGACA TCGACGACGT AATTTTGGTG
GGTGGTCAAA CCCGTATGCC AATGGTGCAG GCTGCTGTTG CCAAGTTCTT TGGTAAAGAG
CCACGTAAAG ATGTAAACCC AGATGAAGCA GTAGCAATGG GTGCAGCTAT TCAAGGTGCG
GTACTTTCTG GTGACGTTAA AGACGTATTG TTGCTAGACG TAACCCCATT AAGCTTGGGT
ATCGAAACCA TGGGCGGTGT AGCAACGCCA TTAATCGAGA AGAATACGAC TATCCCGACT
AAAAAGTCGC AAGTATTCTC TACTGCAGAC GACAACCAAA CAGCTGTAAC TATTCACGTA
GTACAGGGTG AGCGTAAGCA AGCGTCGCAG AATAAATCGT TAGGTCGTTT CGACTTGGCG
GACATTCCTC CTGCACCACG CGGCATGCCA CAAATCGAAG TTACTTTCGA TATTGATGCC
AACGGTATCT TGAATGTGTC TGCTAAAGAT AAGGCTACAG GTAAAGAGCA ATCTATCGTT
ATTAAGGCTT CTTCTGGCTT AAGCGATGAT GAAATCGAAA AAATGGTGCA GGACGCAGAA
GCTAACGCCG ATGCGGACCG CAAGTTCGAA GAAGTTGTGA CTGCGAGAAA CACGCTGGAA
GGGCTTATTC ATGCAACCAA GAAAACGCTT GAAGAGGCGG GTGATAAGGC GACGGCAGAC
GAAAAATCTG CAATCGAAAG CGCAATTGCA GAAGCCGAAG AAGCAGCTAA AGGCGAAGAT
AAAGATGCGA TGGAAGCGGC TACTAAAAAG CTAACTGAAG CATCTAGCTC TCTTGCTCAA
AAACTGTATG CAGAGCAAGG CGCTGCGGGT GCAGGTGCAG CAGGCGCTGC TGATGCCGCC
GCAGATCAGC CAGCAGACGA TGGCGCAGTT GACGCTGAGT TTGAAGAAGT AAAAGAAGAC
GACGGCAAGT AA
 
Protein sequence
MGKIIGIDLG TTNSCVSILE GNKAKVIENS EGDRTTPSIV AFTEDGEILV GQSAKRQAVT 
NPQNTLFAVK RLIGRKFTDD VVQKDISMVP YKIIAADNGD AWVEVKGDKK APPQISAEVL
KKMKKTAEDY LGETVTEAVI TVPAYFNDSQ RQATKDAGKI AGLDVKRIIN EPTAAALAYG
MDKSKGDSTI AVYDLGGGTF DISIIEIADV DGEHQFEVLS TNGDTFLGGE DFDLRLIEYL
AEEFKKTNGI DLHNDPLALQ RLKEAAEKAK IELSSSQQTE VNLPYITADA TGPKHLVVKL
SRAKLESLVE ELVNRSLEPL KMAIKDAGVS VSDIDDVILV GGQTRMPMVQ AAVAKFFGKE
PRKDVNPDEA VAMGAAIQGA VLSGDVKDVL LLDVTPLSLG IETMGGVATP LIEKNTTIPT
KKSQVFSTAD DNQTAVTIHV VQGERKQASQ NKSLGRFDLA DIPPAPRGMP QIEVTFDIDA
NGILNVSAKD KATGKEQSIV IKASSGLSDD EIEKMVQDAE ANADADRKFE EVVTARNTLE
GLIHATKKTL EEAGDKATAD EKSAIESAIA EAEEAAKGED KDAMEAATKK LTEASSSLAQ
KLYAEQGAAG AGAAGAADAA ADQPADDGAV DAEFEEVKED DGK