Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2733 |
Symbol | dnaK |
ID | 3968422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3462095 |
End bp | 3464026 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637921833 |
Product | molecular chaperone DnaK |
Protein accession | YP_528205 |
Protein GI | 90022378 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000184427 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAAA TTATTGGTAT AGATTTGGGT ACAACTAACT CGTGTGTATC CATCTTAGAA GGTAACAAAG CAAAAGTAAT TGAGAACTCT GAAGGTGACC GCACTACACC TTCTATTGTT GCATTTACTG AAGACGGCGA AATTCTAGTA GGTCAGAGCG CTAAGCGTCA GGCTGTTACT AACCCGCAAA ACACCTTGTT TGCCGTTAAG CGTTTGATCG GTCGTAAGTT TACCGACGAC GTTGTACAAA AAGATATTTC CATGGTGCCG TACAAAATTA TCGCGGCAGA TAATGGCGAT GCATGGGTAG AAGTGAAAGG CGACAAAAAA GCACCGCCTC AAATTTCTGC TGAAGTATTG AAAAAAATGA AGAAAACCGC TGAAGATTAC TTGGGCGAAA CCGTTACCGA AGCGGTTATT ACGGTACCTG CGTACTTCAA CGACTCTCAG CGTCAAGCAA CTAAAGACGC CGGTAAAATT GCTGGTTTAG ACGTTAAGCG TATTATTAAC GAGCCTACAG CAGCGGCACT GGCTTACGGT ATGGATAAAT CCAAAGGCGA CAGCACTATT GCTGTATACG ACCTAGGTGG TGGTACTTTC GATATTTCTA TCATCGAAAT TGCCGATGTA GATGGCGAGC ACCAGTTCGA AGTACTTTCT ACTAACGGTG ATACTTTCCT TGGTGGTGAA GATTTCGATT TGCGCTTAAT TGAATACTTG GCAGAAGAGT TTAAGAAAAC AAACGGTATC GATTTACACA ACGATCCGCT TGCATTGCAA CGCTTAAAAG AAGCGGCAGA GAAAGCCAAA ATCGAGCTTT CTTCTAGCCA GCAAACAGAA GTTAACTTGC CATACATTAC TGCCGATGCC ACTGGCCCTA AACACTTAGT AGTGAAGCTT TCGCGCGCTA AGTTAGAGTC TTTGGTTGAA GAGCTTGTAA ACCGTTCTTT AGAGCCGTTA AAAATGGCTA TTAAAGACGC TGGCGTTTCT GTAAGCGACA TCGACGACGT AATTTTGGTG GGTGGTCAAA CCCGTATGCC AATGGTGCAG GCTGCTGTTG CCAAGTTCTT TGGTAAAGAG CCACGTAAAG ATGTAAACCC AGATGAAGCA GTAGCAATGG GTGCAGCTAT TCAAGGTGCG GTACTTTCTG GTGACGTTAA AGACGTATTG TTGCTAGACG TAACCCCATT AAGCTTGGGT ATCGAAACCA TGGGCGGTGT AGCAACGCCA TTAATCGAGA AGAATACGAC TATCCCGACT AAAAAGTCGC AAGTATTCTC TACTGCAGAC GACAACCAAA CAGCTGTAAC TATTCACGTA GTACAGGGTG AGCGTAAGCA AGCGTCGCAG AATAAATCGT TAGGTCGTTT CGACTTGGCG GACATTCCTC CTGCACCACG CGGCATGCCA CAAATCGAAG TTACTTTCGA TATTGATGCC AACGGTATCT TGAATGTGTC TGCTAAAGAT AAGGCTACAG GTAAAGAGCA ATCTATCGTT ATTAAGGCTT CTTCTGGCTT AAGCGATGAT GAAATCGAAA AAATGGTGCA GGACGCAGAA GCTAACGCCG ATGCGGACCG CAAGTTCGAA GAAGTTGTGA CTGCGAGAAA CACGCTGGAA GGGCTTATTC ATGCAACCAA GAAAACGCTT GAAGAGGCGG GTGATAAGGC GACGGCAGAC GAAAAATCTG CAATCGAAAG CGCAATTGCA GAAGCCGAAG AAGCAGCTAA AGGCGAAGAT AAAGATGCGA TGGAAGCGGC TACTAAAAAG CTAACTGAAG CATCTAGCTC TCTTGCTCAA AAACTGTATG CAGAGCAAGG CGCTGCGGGT GCAGGTGCAG CAGGCGCTGC TGATGCCGCC GCAGATCAGC CAGCAGACGA TGGCGCAGTT GACGCTGAGT TTGAAGAAGT AAAAGAAGAC GACGGCAAGT AA
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Protein sequence | MGKIIGIDLG TTNSCVSILE GNKAKVIENS EGDRTTPSIV AFTEDGEILV GQSAKRQAVT NPQNTLFAVK RLIGRKFTDD VVQKDISMVP YKIIAADNGD AWVEVKGDKK APPQISAEVL KKMKKTAEDY LGETVTEAVI TVPAYFNDSQ RQATKDAGKI AGLDVKRIIN EPTAAALAYG MDKSKGDSTI AVYDLGGGTF DISIIEIADV DGEHQFEVLS TNGDTFLGGE DFDLRLIEYL AEEFKKTNGI DLHNDPLALQ RLKEAAEKAK IELSSSQQTE VNLPYITADA TGPKHLVVKL SRAKLESLVE ELVNRSLEPL KMAIKDAGVS VSDIDDVILV GGQTRMPMVQ AAVAKFFGKE PRKDVNPDEA VAMGAAIQGA VLSGDVKDVL LLDVTPLSLG IETMGGVATP LIEKNTTIPT KKSQVFSTAD DNQTAVTIHV VQGERKQASQ NKSLGRFDLA DIPPAPRGMP QIEVTFDIDA NGILNVSAKD KATGKEQSIV IKASSGLSDD EIEKMVQDAE ANADADRKFE EVVTARNTLE GLIHATKKTL EEAGDKATAD EKSAIESAIA EAEEAAKGED KDAMEAATKK LTEASSSLAQ KLYAEQGAAG AGAAGAADAA ADQPADDGAV DAEFEEVKED DGK
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