Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2727 |
Symbol | |
ID | 3968416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3453893 |
End bp | 3454375 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637921827 |
Product | GreA/GreB family elongation factor |
Protein accession | YP_528199 |
Protein GI | 90022372 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.148274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTTAA CTAAATACCC AATGACTGTC GCAGGCGAAC TTGCTTTGCG CGAAGAGTTG GAAAGGCTGA AAAAAGTCGA TCGTCCACGC ATTGTGCAAG CTATTGCAGA GGCGCGTGAG CACGGCGACT TAAAAGAAAA TGCCGAGTAC CATGCGGCGC GTGAGCAACA GGGTTTTTGC GAAGGGCGAA TTCAAGAAAT TGAAGCCAAG CTTTCTAACG CGCAAGTTAT TGATGTTAAG ACTATCCCAC ACTCAGGTAA GGTGATTTTC GGTACAACCG TTGACTTAAT TAACGTAGAA ACCGATGAAG CCATCACTTA CACTATTGTG GGTGAAGATG AAGCGAGTAT TAAGCTAAAT AAAATATCAG TGACTTCTCC CATTGCGCGT GCGCTAATTG GTAAAGAGGA AGGTGATGTT GCCGTTGTGC GTGCGCCCGG TGGCGAAATT GAATATGAAA TTGATTCAGT AAAACATATT TAA
|
Protein sequence | MSLTKYPMTV AGELALREEL ERLKKVDRPR IVQAIAEARE HGDLKENAEY HAAREQQGFC EGRIQEIEAK LSNAQVIDVK TIPHSGKVIF GTTVDLINVE TDEAITYTIV GEDEASIKLN KISVTSPIAR ALIGKEEGDV AVVRAPGGEI EYEIDSVKHI
|
| |