Gene Sde_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2727 
Symbol 
ID3968416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3453893 
End bp3454375 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content45% 
IMG OID637921827 
ProductGreA/GreB family elongation factor 
Protein accessionYP_528199 
Protein GI90022372 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.148274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTAA CTAAATACCC AATGACTGTC GCAGGCGAAC TTGCTTTGCG CGAAGAGTTG 
GAAAGGCTGA AAAAAGTCGA TCGTCCACGC ATTGTGCAAG CTATTGCAGA GGCGCGTGAG
CACGGCGACT TAAAAGAAAA TGCCGAGTAC CATGCGGCGC GTGAGCAACA GGGTTTTTGC
GAAGGGCGAA TTCAAGAAAT TGAAGCCAAG CTTTCTAACG CGCAAGTTAT TGATGTTAAG
ACTATCCCAC ACTCAGGTAA GGTGATTTTC GGTACAACCG TTGACTTAAT TAACGTAGAA
ACCGATGAAG CCATCACTTA CACTATTGTG GGTGAAGATG AAGCGAGTAT TAAGCTAAAT
AAAATATCAG TGACTTCTCC CATTGCGCGT GCGCTAATTG GTAAAGAGGA AGGTGATGTT
GCCGTTGTGC GTGCGCCCGG TGGCGAAATT GAATATGAAA TTGATTCAGT AAAACATATT
TAA
 
Protein sequence
MSLTKYPMTV AGELALREEL ERLKKVDRPR IVQAIAEARE HGDLKENAEY HAAREQQGFC 
EGRIQEIEAK LSNAQVIDVK TIPHSGKVIF GTTVDLINVE TDEAITYTIV GEDEASIKLN
KISVTSPIAR ALIGKEEGDV AVVRAPGGEI EYEIDSVKHI