Gene Sde_2723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2723 
Symbol 
ID3968412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3450717 
End bp3452165 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content47% 
IMG OID637921823 
Productsensor histidine kinase 
Protein accessionYP_528195 
Protein GI90022368 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA TTAAATTTAA AATCTGGCTC GCCTTTTTTA TTACCCTTAC CGTATGTATG 
GCTACCATGC TTGTGGTAAC GCATACCACA ATGAAAAAAG GGTTTTTGCG ATACGTAAAT
ATCGAAACCA TCAACAAGCT AGATCTGCTC AAAAATGAAA TAGCTGAAAT TTACACCCGC
ACTGGGTCGC TAGAGCTATT TACCACCAAG CCGCACCTTT GGGACAAACT AAAATACAAA
GCCTATAGCC CCTACTTAAA AATTCGCGCA GACCAACGAC GTAACGACGG CCCACCAGCG
CCCCCCAAAA GTAAAGAGTT GCCCCCCAAA GACAAACACG GTGTGGGCCG CCATCAACGC
GAGTTTATGG AAAGGTTAAT TTTGACCGAT GAGAACAAAA ATGTAATTTC TGGTCGCTAC
CGCAAAAACT CTGATTACAG CTGGTCGGCA ATAAAAGCAG AAGACAAAAT CATCGCCTAC
GTGGGTTATG TGGCCCCCTC AGAATTTTTG CGCGATGTAG ATAAACACTT CTTGTATAAC
CAACTTCGCG CGCTCTCTAA AATTAGTATT TTCTTGGTGA TCATCTCATT CATAACGGTG
CTAATCATCT CCCACAAGCT GGTTAAGCCA TTAGTTGCCC TATCGCGCAG TGCAAAGCAG
CTAGCTGCCG GCGAGTACAA CGTGCGCATA CAACCTCAAA CCTCCGACGA GGTTGGCGAG
CTGTGCCACA ACTTCAACGA GCTTGCCCAC ACCCTAGAGG CTAACGAACA ATCTCGGCGC
CAATGGGTAG CCGATATTAG CCACGAAATG CGCACACCAT TAGCTGTAAT CAAAGCGCAG
ATTGAATCAA TGCAAGATGG TATCCGCCAG CCCTCCCAGG CCAACTTAGC CCTTTTAAAA
GACAAAACAG ATTCGCTAAA TGCGCTGGTT AACGACCTCT ACGAGCTTTC GCTTTCAGAT
TTGGGCGCGC TTACCTATAG CAAAGAGGTA TTTAGTTTTA ACCAACTGTT TGAGCACACG
CAAGACGAAG TGGAAGTGCG CACCAATGGC AAAGAACTAA CGCTTACCAT CGAAAACAAC
TTAAACGAGC AGCATAAAAT TTACGGCGAC AGCAGCCGCT TAGCGCAGCT AATTAACAAC
TTGATTGAGA ACAGCCTGCG CTACACAGAT ACCCCTGGCC AAATAAAAAT ATGGTCTGCT
GAAACGCAGG GCAATCTTGA GTTCCACATT GAAGACAGCG CGCCAGGCGT TAACCCAGAT
CAGCTAGATA AAATTTTTGA CAGGCTTTAC CGCTTAGATT CTTCGCGCAA CCGCGCTACA
GGCGGCGCCG GCCTAGGCTT ATCTATATGT AAAAACATCG TAGAGGCCCA CAACGGCACT
ATTCGAGCAC TGCAATCGAA GCTCGGAGGC ATTCATATAA TCATTTCACT GCCACGTTGG
ACGAGGTAA
 
Protein sequence
MKSIKFKIWL AFFITLTVCM ATMLVVTHTT MKKGFLRYVN IETINKLDLL KNEIAEIYTR 
TGSLELFTTK PHLWDKLKYK AYSPYLKIRA DQRRNDGPPA PPKSKELPPK DKHGVGRHQR
EFMERLILTD ENKNVISGRY RKNSDYSWSA IKAEDKIIAY VGYVAPSEFL RDVDKHFLYN
QLRALSKISI FLVIISFITV LIISHKLVKP LVALSRSAKQ LAAGEYNVRI QPQTSDEVGE
LCHNFNELAH TLEANEQSRR QWVADISHEM RTPLAVIKAQ IESMQDGIRQ PSQANLALLK
DKTDSLNALV NDLYELSLSD LGALTYSKEV FSFNQLFEHT QDEVEVRTNG KELTLTIENN
LNEQHKIYGD SSRLAQLINN LIENSLRYTD TPGQIKIWSA ETQGNLEFHI EDSAPGVNPD
QLDKIFDRLY RLDSSRNRAT GGAGLGLSIC KNIVEAHNGT IRALQSKLGG IHIIISLPRW
TR