| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2720 |
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| Symbol | |
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| ID | 3968409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3447442 |
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| End bp | 3449367 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921820 |
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| Product | membrane protease FtsH catalytic subunit |
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| Protein accession | YP_528192 |
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| Protein GI | 90022365 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000311283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACGATA TGGCTAAGAA TTTGGTACTT TGGTTGGTTA TTGCCACTGT ACTGTTTATG
GTCTTTAAAA ACTTTAATGA GCCGGCTGTA CAGCAAGAAA TGGCCTATTC AGACTTCGTT
ACCGAAGTGC GCGCAGGTAA TGTGCGCGAA GTGGTTTTTG AGGGCAACAT TATTCGCGGT
GTTGGGTATA ACAACCAGCC GTTTAGAGTG GTAATGCTAC CAACAATCGA TTTGGATTTA
CGCAGCGAGC TAGTTGAAAA CGGCGTAGCG TTTAAGGCCG AGAAAAAAGA AGAGGCTGGG
TTCTTTGAGA ACTTGCTACT GGCAACCGTA CCTGTATTGT TGTTTATCGC TGTGTTCATA
TTCTTTATGC GTCAAATGCA GGGTGGTAGC GGTGGTCGCG GCGGGCCTAT GAGCTTTGCT
AAAAGTAAAG CGCGTTTGCT TGGCGAAGAT CAGGTTAAAA CAACCTTTGC AGATGTAGCC
GGCGTAGATG AAGCCAAAGA AGAAGTGTCT GAGTTGGTGG AATATTTGCG CGATCCAAGC
AAGTTTCAGC GCTTAGGTGG CCGAATCCCC CGTGGTGTTT TAATGTCTGG GCCTCCCGGT
ACAGGTAAAA CGCTGCTCGC AAAAGCAATT GCGGGTGAGG CGAAAGTACC TTTCTTCTCT
ATTTCGGGCT CAGATTTCGT AGAAATGTTC GTTGGTGTGG GTGCATCCCG CGTGCGAGAC
ATGTTTGAGC AGGCTAAAAA GCAGGCTCCT TGTATTATCT TTATCGATGA GATCGATGCC
GTGGGTCGCC ATCGTGGCGG CGGTGGTCAT GGTGGGGGTC ACGACGAGCG CGAGCAAACG
CTCAACCAGT TACTAGTAGA GATGGACGGT TTTGAAGGTA ACGAAGGTGT AATTGTTATT
GCTGCAACGA ACCGCTCAGA TGTACTGGAT AAAGCATTGC TTCGCCCAGG CCGTTTCGAC
CGCCAAGTAA ACGTTGGCTT GCCAGATGTG CGAGGCCGGG AGCAAATTCT TAAAGTGCAT
ATGCGTAAAG TGCCCATTAG CGATGCAGTT AAAGCTTCTA TTATTGCGCG CGGTACGCCA
GGGTTCTCTG GTGCCGACTT GGCCAACCTT GTTAACGAGG CCGCTTTGCT AGCTGCCCGT
GGCAATAAGC GCTTAGTTAC CGAAGAAGAG TTTGAAAATG CGCGCGATAA AATCCTTATG
GGTACCGAGC GTCGCACTTT AGTGATGACC GAGCAAGAGA AAGAGAGCAC GGCTTATCAC
GAAGCCGGTC ACGCTATTGT TGGCTACTTG TCGCCAGAGC ACGACCCTAT TCACAAAGTT
ACTATTATTC CTCGCGGTCG CGCTTTAGGT GTAACGCACT TCTTGCCGGA AGGCGATCGT
ATTAGTGAGA GCAAGCGCAA AATGATGGGC GATATCGCCT GTGCATATGG CGGCAGAATT
GCAGAAGAGA TGATCTATGG CGCCGATGGG GTATCTACCG GTGCATACGG CGATATTCGT
GGTGCCACGG CAATTGCCCG CGCTATGGTT GTAAACTACG GTTTGTCAGA CACGCTTGGC
CCTCTAGATT ACGATGCTCG AGATAGTGAC GGTATTGGCT CTAAAAAGAT TTCTGGGCAC
ACCGCGCGTT TGATCGACGA AGAAGTTAAA AATATTACCG ATGCTTGCTA CAAGCGAGCA
GAACAAATAC TTGAAGAGAA TCGCGATATT CTAGAAGCCA TGAAAGATGC GCTTATGGAG
TATGAGACTT TAGATTCCGA CCAAGTATCA GATTTAATGG CGCGCAGAAA GATACGTCCT
CCCAAAAGTT GGAGTGACGA TTTGACTGAT GGTGGTGCTT CAGCTGGCGA AACCGACTCT
GGTAGCACAG CGGAAAAAAC CAAAGCATCG GATTCGTCCT TAGGCGGCCC TGCTAGCGAG
CATTAA
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| Protein sequence | MNDMAKNLVL WLVIATVLFM VFKNFNEPAV QQEMAYSDFV TEVRAGNVRE VVFEGNIIRG
VGYNNQPFRV VMLPTIDLDL RSELVENGVA FKAEKKEEAG FFENLLLATV PVLLFIAVFI
FFMRQMQGGS GGRGGPMSFA KSKARLLGED QVKTTFADVA GVDEAKEEVS ELVEYLRDPS
KFQRLGGRIP RGVLMSGPPG TGKTLLAKAI AGEAKVPFFS ISGSDFVEMF VGVGASRVRD
MFEQAKKQAP CIIFIDEIDA VGRHRGGGGH GGGHDEREQT LNQLLVEMDG FEGNEGVIVI
AATNRSDVLD KALLRPGRFD RQVNVGLPDV RGREQILKVH MRKVPISDAV KASIIARGTP
GFSGADLANL VNEAALLAAR GNKRLVTEEE FENARDKILM GTERRTLVMT EQEKESTAYH
EAGHAIVGYL SPEHDPIHKV TIIPRGRALG VTHFLPEGDR ISESKRKMMG DIACAYGGRI
AEEMIYGADG VSTGAYGDIR GATAIARAMV VNYGLSDTLG PLDYDARDSD GIGSKKISGH
TARLIDEEVK NITDACYKRA EQILEENRDI LEAMKDALME YETLDSDQVS DLMARRKIRP
PKSWSDDLTD GGASAGETDS GSTAEKTKAS DSSLGGPASE H
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