Gene Sde_2710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2710 
Symbol 
ID3968452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3438763 
End bp3439218 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content47% 
IMG OID637921808 
Producthypothetical protein 
Protein accessionYP_528182 
Protein GI90022355 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.955868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGAA AAGAAACCCG GTTAGAGAAA ATGCTTGCTC CTGTGGTTGA ATCCTTGGGC 
TGTGAGTTCT GGGGGCTTGA GCTGCGCATG CAGGGCAAGC AATCACTGTT ACGTATTTTT
ATAGAAAAAG AAGCTGGCGT TGGCGTTGAA GACTGCGAAA ATGTGAGTCG TCAAGTGAGT
GCTGTGCTCG ATGTGGAAGA TCCAATCTCT GGGGAATACA CATTAGAAGT CTCCTCTCCT
GGGATGGACC GCCCGTTATT CACTCTCGAT CATTTTACGC GCTTTGTTGG CGAGCATGTG
TCTTTGCGAT TGCGAACCGC GTTTGATGGA CGCAGAAACT TTAGTGGCAA GTTAACAGCG
GTTGAAGATG ATGAAGTCAT CCTGCTGATT GATGCCGAAG AGTACATCTT GCCGTTTGAG
CTTATCGATA AAGCTCAGGT GGTACCTAAA TTTTAA
 
Protein sequence
MAGKETRLEK MLAPVVESLG CEFWGLELRM QGKQSLLRIF IEKEAGVGVE DCENVSRQVS 
AVLDVEDPIS GEYTLEVSSP GMDRPLFTLD HFTRFVGEHV SLRLRTAFDG RRNFSGKLTA
VEDDEVILLI DAEEYILPFE LIDKAQVVPK F