| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2694 |
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| Symbol | |
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| ID | 3968474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3419376 |
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| End bp | 3421586 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921792 |
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| Product | transcription elongation factor GreA / replication restart DNA helicase PriA |
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| Protein accession | YP_528166 |
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| Protein GI | 90022339 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000288054 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00453215 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAAGC TCTACCTAGA AATCGCCCTA CCCGTTCCTT TGCGCCGCAC ATTTGACTAC
CTCACCAATT TTCAGGGTGA CCCAAATGGG CTAATAGGCT GTCGCGTACA GGCGCCGTTT
GGCAATCAAA CCTTAATTGG CATAATCATT GGGGTGAAGG CGCAGTCGGA AACTCCTGCC
GACAAAATGA AAGACATTCA CACCATTATT GATGACACAC CACTTATATC TCACCTAGAT
TTGCAGCTAT TTAGCTGGGC TGCCAATTAC TACCACCACT CTCTAGGCGA GGTATTACAC
GCGTCCATCC CCCAAAAGTT GCGCCAAGGC GAACGCCAAG AGCACGAACA ACTCATAAGC
GCGTGGAAAC ACACCCCCGA AGGGATGGGA TTGCCAGAAA CAGCATTAAA CCGCTCTAAA
AAGCAGCAAG AAATACACAG GTACCTGCTA CAAAACACAC AATTTACCCG CTCCACGGCA
CAAAGGCTTG GTTTTTCCAC CTCTGCAATA AAAGCACTTA AAGACAAAAA TCTTATCGAA
GAAATTTTAG TTAAAGACTC GATTGAACAA GTGCAAACAA ATAATAGCTT GCTCAACAAT
ACGCCACTCA CCCTAAACCA AGAGCAAACA GCCGCACAAG AAAGCGTTAT TTTTCACCGC
TTTGGGGCCT ACCTGCTTGA TGGTGTAACA GGCAGCGGCA AAACCGAAGT GTACCTACAA
CTGGTGGCCA GAGCCTTACA AGCAGGCACA CAAGCACTTG TACTTATTCC TGAAATAGGC
CTGTCTCCCC AAACAGTAGG CCGATTTAAA GACAGGTTTA GCGTAGAAAT AGCCGAACTC
CATTCCTCCA TTAACGAAGC CAAACGCGCC GAACATTGGC AAGCAGCAAA AAGCGGCCGT
GCAAAAATAG TGATAGGCAC GCGCCTAGCT GCCTTAGCCG CACTTAACAA ACCCGGCATT
ATCATTGTGG ATGAAGAGCA CGACCTCTCA TATAAACAAC ACGACGGCTT TCGTTATTCG
GCGCGAGACA TATGCGTTTA CCGAGCCAAA CAGCACAACA TTCCCGTGGT ATTAGGCTCT
GCAACCCCTT CACTAGAAAC CCTAAACAAC GCCATTACTG GTCGCTACCA ACATTTAAAA
CTCACCCAGC GAGCAAGCAC AGCCACACCG CCTCATATCG AAAGTATCGA CATTCGCAAC
CAGCAATTGA CAGCAGGACT GTGTGAATCG GCAATAGAAG AAATTAGGCA CACCCTACAA
CGCCAACAGC AGGCGCTGGT ATTTCTTAAT CGCAGAGGGT TTGCCCCGTC GCTCTTTTGT
CATCACTGCG GCTGGCAAGC CAAATGTACG GGCTGCGAAC TACCTATGAC CTTTCACTCG
CACCCAAGAC ACCTACACTG CCACCGCTGC GACAGGCAAA ACGGCGTACC TCGCGCCTGC
CCAAGCTGCA AAAACCAAGC ATTCAGCCAT CGCGGTAGTG GTACCGAGCA AATCGAGCTC
TTTTTGGCGA AGCAGTTTCC AAATACTCCA GTAATACGTA TAGATAGAGA CACCACCAGC
TCTAAGAAGG CGATGCAAAA GCTATTAGAG CCCGCTTACG CAGGCACGCC TTGCATACTG
GTTGGCACAC AAATGCTAGC CAAGGGGCAC CATATTCCCG GTATTAACCT CGCTGTTATT
GCCGATGCAG ATCAAGGCCT TATGAGTGCC GATTATCGCG GTGTAGAACA AGTTGGCCAA
CTTGTTACTC AAGTGGCCGG CAGGGCTGGG CGCGCATCGT CAACGGGTAA AGTACTTATC
CAAACCCACC AACCAGACCA CCCGTTAATG CGTGTGCTTA TTGCGGAAGG CTACAATAGC
TTTGCGGTGC AACTGCTAGC AGAACGCAAA CATTCCGGCC TACCACCTTA CGGATACTCT
GCTTTAATTC GCAGCGAGTC CAAGCGGCCC GAAAACGCGC TTGCCATATT ACAACTGATA
CATGGCGCGA TTAAAAATAC TGGCAACAAA CACACCATCA CCACCATCGG CCCAATGGCA
GCCCCTATAG AAAAAATAGG CAACAGGTTT AGGTTTCAAT ACCAACTTTT CTGTAATTCA
AGAAAGGAGC TTCACGCAAC TTTAAAAGCC GTGCTAAGCG AGGTAGAAGT TAAAGCGGAG
GCGAGAAGAA CGCGCTGGTC GGTGGATATT GATCCGGTGA CCAGCGCTTA A
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| Protein sequence | MNKLYLEIAL PVPLRRTFDY LTNFQGDPNG LIGCRVQAPF GNQTLIGIII GVKAQSETPA
DKMKDIHTII DDTPLISHLD LQLFSWAANY YHHSLGEVLH ASIPQKLRQG ERQEHEQLIS
AWKHTPEGMG LPETALNRSK KQQEIHRYLL QNTQFTRSTA QRLGFSTSAI KALKDKNLIE
EILVKDSIEQ VQTNNSLLNN TPLTLNQEQT AAQESVIFHR FGAYLLDGVT GSGKTEVYLQ
LVARALQAGT QALVLIPEIG LSPQTVGRFK DRFSVEIAEL HSSINEAKRA EHWQAAKSGR
AKIVIGTRLA ALAALNKPGI IIVDEEHDLS YKQHDGFRYS ARDICVYRAK QHNIPVVLGS
ATPSLETLNN AITGRYQHLK LTQRASTATP PHIESIDIRN QQLTAGLCES AIEEIRHTLQ
RQQQALVFLN RRGFAPSLFC HHCGWQAKCT GCELPMTFHS HPRHLHCHRC DRQNGVPRAC
PSCKNQAFSH RGSGTEQIEL FLAKQFPNTP VIRIDRDTTS SKKAMQKLLE PAYAGTPCIL
VGTQMLAKGH HIPGINLAVI ADADQGLMSA DYRGVEQVGQ LVTQVAGRAG RASSTGKVLI
QTHQPDHPLM RVLIAEGYNS FAVQLLAERK HSGLPPYGYS ALIRSESKRP ENALAILQLI
HGAIKNTGNK HTITTIGPMA APIEKIGNRF RFQYQLFCNS RKELHATLKA VLSEVEVKAE
ARRTRWSVDI DPVTSA
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