| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2691 |
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| Symbol | |
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| ID | 3968471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3415105 |
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| End bp | 3416172 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921789 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_528163 |
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| Protein GI | 90022336 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000540139 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00311169 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTATTC TCAACTTGTT CACTAAGAAA AAGAACCCCA TGCTGGGATT GGACGTGAGT
TCAACGTCCG TAAAGCTCTT GGAGCTTAGC CGGCATGGAG ATAGCTATCG GGTTGAGAAT
TACGCCGTGC GCGCTCTTCC TGCCAACTCC GTGGTCGAGA AAAACATCAA TGATGTGGAG
GCTGTCGCGC AGGCGGTCAA AGCTGTTGTG CAAACCTCTC GTACCAAAAT CAAAGATGCT
GCCGTCGCGG TCGCAGGCTC GTCGGTTATC ACCAAGGTGA TCGACATGCC AGCGGATCTG
AGCGAAGACG ATATGGAGTT GCAGATATCT ATCGAGGCAG ACCAATATAT TCCCTACCCC
TTAGAAGAGG TCGCCATTGA CTTCGATATT CAGGGGCCCT CAGCCAAAAG TGAAGACCGT
GTTGATGTGC TTTTGGCTGC GTGCCGAAGG GAAAACGTCG ATATTCGCGC AACCATGCTA
GAGCTTGCCG ACCTCAACCC TAAAGTGATT GATGTAGAAG CCTATACCAT GGAGCGTGCA
TTTGCGCTTG TGCAAGAGCA ACTAGAAGAT CAAGACGAAC AGGTTGTGGC GGTACTCGAT
ATTGGGGCGA CCATGACGAC GCTAAGTGTG TTGGTCGACG GAAAAACAAT ATACACGCGT
GAGCAGTTGT TCGGCGGTAA GCAGCTTACG GAAGAAATTC AGCGTCGATA CGGCCTTTCT
GCTGAAGAGG CTGGGTTGGC TAAGAAACAA GGTGGCTTAC CTGATGATTA TGAGCCAGAA
GTGTTGGAGC CTTTCAAGGA TGCTGTGGTT CAACAGGTTA CACGTTCTTT GCAGTTCTTC
TTTTCCTCGA GCCAGTATAA CGATGTAGAC CATATCGTTA TTGCGGGCGG TGTTGCTAGC
TTGGAGGGAT TGTCTAACCT AGTAGAAGAA AAGTTAGGCA CTTCGGTTAC CATCGCAAAT
CCATTTGCCA ATATGTCTGT TTCCTCTCGC GTTAACGCAA CCGCGCTATC GAATGATGCG
CCGTCGCTAA TGATCGCAGT TGGTTTGGCG CTAAGGAGCT TCGAATAA
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| Protein sequence | MSILNLFTKK KNPMLGLDVS STSVKLLELS RHGDSYRVEN YAVRALPANS VVEKNINDVE
AVAQAVKAVV QTSRTKIKDA AVAVAGSSVI TKVIDMPADL SEDDMELQIS IEADQYIPYP
LEEVAIDFDI QGPSAKSEDR VDVLLAACRR ENVDIRATML ELADLNPKVI DVEAYTMERA
FALVQEQLED QDEQVVAVLD IGATMTTLSV LVDGKTIYTR EQLFGGKQLT EEIQRRYGLS
AEEAGLAKKQ GGLPDDYEPE VLEPFKDAVV QQVTRSLQFF FSSSQYNDVD HIVIAGGVAS
LEGLSNLVEE KLGTSVTIAN PFANMSVSSR VNATALSNDA PSLMIAVGLA LRSFE
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