| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2686 |
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| Symbol | |
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| ID | 3968466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3410678 |
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| End bp | 3411187 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921784 |
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| Product | shikimate kinase |
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| Protein accession | YP_528158 |
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| Protein GI | 90022331 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.536815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0662498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTGATA ACGTTGTATT GGTCGGCCCC ATGGGGGCCG GCAAATCTAC CATCGGTAGG
TTATTAGCTG CCCGTCTTGC ATTTCATTTC TATGACACAG ATTCGGTAAT CGAGGAGCGC
ACTGGTGCGG ACATTCCTTG GATCTTCGAC GTAGAGGGTG AGGAAGGGTT TCGTGCACGT
GAATCTGCAG TTTTGGGTGA GCTTGTGCAT TCCTCAGGTG CTGTCATCGC AACCGGCGGT
GGTATAATAA TGCGTGAAGT TAATCGTGAA ATGCTGTCTC AAGCAGGTGC TGTGGTTTAC
TTGACTGCAA GTATTGATCA GCTCGTAGAG CGCACATGTA AAGATAAAAA AAGGCCTCTT
CTCCAAGTGG CTGACCCGCG CGCAAAAATT ATTGAGCTTA TAAAATTGCG CGACCCCCTT
TATAGGGAGG TGGCAACGTG TGTGGTTGAA ACTGATGGGC GCTCCCCTCG TTTCGTTGTT
CAGCATATTG CTGAACTGCT GAATGCCTAA
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| Protein sequence | MIDNVVLVGP MGAGKSTIGR LLAARLAFHF YDTDSVIEER TGADIPWIFD VEGEEGFRAR
ESAVLGELVH SSGAVIATGG GIIMREVNRE MLSQAGAVVY LTASIDQLVE RTCKDKKRPL
LQVADPRAKI IELIKLRDPL YREVATCVVE TDGRSPRFVV QHIAELLNA
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