| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2685 |
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| Symbol | |
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| ID | 3968465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3409428 |
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| End bp | 3410516 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921783 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_528157 |
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| Protein GI | 90022330 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0391774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCT TACATGTAGA CTTGGGGGAT AGGAGCTATC CGATTTTTAT TGGCGCTGGC
CTGTTAGCTA ACCCTGAAAA GTTTTTACCT TATTTGGCGG CGAAACAGGT GCTGGTTGTT
ACAAATACAA CGATCGATGC GCTGTATGGC GACAGTTTTT TCTCGTTGTT CGAGGGGATG
GATAAAGCGC ATAAGGTTGT ATTGCCTGAT GGGGAGTCTT ATAAAAATTT AGAAGCGCTA
AACCAAATAT TTGATGCTTT GCTAGAAGGG AAGCACAATC GTAAGACCAC ATTGGTGGCT
TTAGGGGGTG GTGTTGTAGG TGATATGACC GGCTTTGCTG CTGCAGCTTA TCAGCGTGGT
GTTGGTTTTA TTCAAGTGCC AACCACACTG CTGTCTCAGG TTGACTCTTC TGTGGGGGGG
AAGACCGGCG TGAACCATCC GCTTGGCAAG AATATGATTG GTGCTTTCCA TCAGCCGAAT
GTGGTGGTTA TTGATACCGA TGTATTAAAA ACATTGCCTG ATAGAGAGCT GTCTGCCGGA
ATGGCAGAGG TTATCAAATA TGGTCTTATT GCAGATTATG AATTTTTCTG CTGGTTAGAG
TCTAATGTAA AGGCATTGAT GGCAAGGGAT GTTGATGCAC TCGAGTACGC AATTGAGCGG
TCTTGCCAAA TTAAAGCCGA TGTTGTTGCT CAAGATGAGA CCGAGTCAGG TATTCGCGCG
ATATTGAATC TTGGGCATAC GTTTGGCCAT GCGATTGAGA GTGATCAAGG TTATGGTAAT
TGGCTGCATG GTGAAGCGGT GGGCGCCGGT ATGGTGATGG CCTGTGAATT GTCTTGTCGG
ATGGGATGGA TAGATAAGCC GTTTTGTGAG CGTGCAGTAG CGCTGATTGC TGCTGCAGGT
TTGCCTATTG CGCCGCCGGA ATCGATGTCG CCAGAAGATT TTATGAAGTA CATGGCTGTG
GATAAAAAGG TCTTGGATGG TGGTTTGCGC TTGGTGTTAC CAAATAAACC GGGTTCTTCC
ATTGTGACCG ATTCATTTGA TGCTGACGCG CTAGCTGCGA CTTTGGGTCG TACTGGGCAG
CTGGGTTAG
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| Protein sequence | MKTLHVDLGD RSYPIFIGAG LLANPEKFLP YLAAKQVLVV TNTTIDALYG DSFFSLFEGM
DKAHKVVLPD GESYKNLEAL NQIFDALLEG KHNRKTTLVA LGGGVVGDMT GFAAAAYQRG
VGFIQVPTTL LSQVDSSVGG KTGVNHPLGK NMIGAFHQPN VVVIDTDVLK TLPDRELSAG
MAEVIKYGLI ADYEFFCWLE SNVKALMARD VDALEYAIER SCQIKADVVA QDETESGIRA
ILNLGHTFGH AIESDQGYGN WLHGEAVGAG MVMACELSCR MGWIDKPFCE RAVALIAAAG
LPIAPPESMS PEDFMKYMAV DKKVLDGGLR LVLPNKPGSS IVTDSFDADA LAATLGRTGQ
LG
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