| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2680 |
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| Symbol | |
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| ID | 3968460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3398904 |
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| End bp | 3400370 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921778 |
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| Product | HD-GYP domain-containing protein |
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| Protein accession | YP_528152 |
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| Protein GI | 90022325 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.467072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTCC AGCTGATGTT CAATCATTGT GAAATGATTG ACAGGGATGG ACAAAACTAC
CGTTGTAAGG GAATTTGTGT GGCAATTAAG CAAGTAAAGC TTCAAGTTAA TGAACTCACA
GTTGGGATGT TTGTATCCGG GCTAGATAGA CCGTGGTCGC AAACACCGTT CCCTTTGCAG
GGCTTTTATA TTCGCGATCT CGACGAGATA AAAGAGCTTA AGGTTCACTG TAGCTTCGTC
TATATCGATG TCCAAAAGGG CACAGCCCCG CTTAAAAACA CCCTGCGTAA ATTATCATCA
AGTCGCGCGT CTGTTAGTTC GCGCAAGCCC GACCGCAACG CGCGACGCGC GCCAATGCCG
GATGTGGCTC CGCTTAAAAT ACGCCGCAAC ACCTACACCA CTATTGCCCC GCTAGAAAAA
GAAATGGGCA AGGCAAAAGA GCTGCATCAG CAGGTTTACC ATGCTGTGGG TGCGGTGATG
GAGCAGGTGA ATCAAGATCA TTCCAACTTC CCAGTGCGCG AAGCTAAACG GGTAGCAGGG
CATATGGTGG ATAGTGTTAT TCGCAGCCCA GATGCGTTTA CGTGGTTGAG TCGCGTACGT
GAAAAAGATG CTTACACCTA TAGCCACGCA GTGCGTTCGG CTGTTTGGGC TATCTTGTTT
GGGCGCCATA TTGGCCTGCC AAAGCAGGAT TTGGACGTGC TAGCCATGGG GGTGCTTCTA
AAGGATATAG GCAAAACTAA GTTACCTACC TATCTGCTAG AAAAGCCTGA TCGTACATCG
GATGAACAAG AAGCCTACGA AAAGTTTGTA GATTACGGTG TTGAGATCTT ACGTAAATTA
TCCGACGTTC AACCGCGTAT TACCTCCGTA GTAAAAACCC ACTGCGAACG AGTAAACGGC
TCTGGGTTTC CGCAGCACTT GCGTGGGGAT AAAATCCCAT TACTGGGTAA AATTGCAGGC
ATAGTTACCT TCTACGATGA AACAACCAAC CCGCGCGGTC AGGAAAAACC TCTGCCACCC
TCAAAAGCTG TAGCCAAGCT ATATGACTTG CGCGAAATTG AGTTCCAAGA GGAGTTGGTA
GTAGAGTTTA TTCGCGCTAT TGGCTTGTAC CCAACTGGCA CTTTAGTGGA ATTATCTACC
GGTGAAGTGG GCGTAGTTGT AGAGCAAAAC TTCGAGCGCC GTTTAAAGCC AAAAGTAATG
GTTGTTACCG ATGCGTACAA GCAGCCCTTG TACGAAATGG TATTGGTTGA TTTGGCTGCA
GATGAAAAAG AAAAGCAGCA AAAAGTCGAT GCAGGTAAGG TGCATCCAAG TGAGTTAGAG
CGGGTGGAAA TTGTACAAGA TTTGGAGCCA GGCTCTTACG ATATCGATGT GGCGGGTATA
CGTGATAACT ATATCGCAAT GAAAGAGAGC AAAGGCTTAC TCTCATTGTT TAAGCGCAAG
GTAAAATTTC TGCCCGGCTT TAATTAA
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| Protein sequence | MLLQLMFNHC EMIDRDGQNY RCKGICVAIK QVKLQVNELT VGMFVSGLDR PWSQTPFPLQ
GFYIRDLDEI KELKVHCSFV YIDVQKGTAP LKNTLRKLSS SRASVSSRKP DRNARRAPMP
DVAPLKIRRN TYTTIAPLEK EMGKAKELHQ QVYHAVGAVM EQVNQDHSNF PVREAKRVAG
HMVDSVIRSP DAFTWLSRVR EKDAYTYSHA VRSAVWAILF GRHIGLPKQD LDVLAMGVLL
KDIGKTKLPT YLLEKPDRTS DEQEAYEKFV DYGVEILRKL SDVQPRITSV VKTHCERVNG
SGFPQHLRGD KIPLLGKIAG IVTFYDETTN PRGQEKPLPP SKAVAKLYDL REIEFQEELV
VEFIRAIGLY PTGTLVELST GEVGVVVEQN FERRLKPKVM VVTDAYKQPL YEMVLVDLAA
DEKEKQQKVD AGKVHPSELE RVEIVQDLEP GSYDIDVAGI RDNYIAMKES KGLLSLFKRK
VKFLPGFN
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