Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2678 |
Symbol | |
ID | 3968497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3396977 |
End bp | 3397807 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637921776 |
Product | fused rhodanese domain-containing protein/phosphatidylserine decarboxylase |
Protein accession | YP_528150 |
Protein GI | 90022323 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGATA GACTGCCCTT AATCGCCGAG CCTGCTGCGG TACACGCCTT TTTAAAAACG CACCGAGAAG CCGTTTCCAC TTACCCTGTG TGCATTGTCG ACCTGTGCAG CGAACAAACC TATCGCCACG GTCATATTGA AGGGGCTATC TCTATACCTG TGGGTATTTT AATGAGCGGC CAACCGCCAG CGGCAGGTAA AATTGCGTCG CAAGACCAAC TGTCACGCTT ATTTTCTTAC CTAGGCACCA CCAGCGATAC CCACTTTATA GTGTATGACG ACGAAGGCGG CGGCTGGGCC GGGCGCTTCG TGTGGACGCT CGACGTAATA GGTCATAAAC ATGTTACCGT TATCGACGGA GGCCTCATTG CGTGGCAAGG TGACGGCCTG CCGCTTGTGA CAGAACCGTT TAGCCCAGAA CCCGAAAACT ACCCCGTAAC CATTGATTCC ACGCAAATTG TTACTGCACA AAATATCGTC GCGTCGCTAG GCGCCCCTGA TTTCGCTATT TGGGATGCAC GCAGCCGTGC GGAATACACA GGCATGAATA AATTCGCCGC CCGCGGGGGG CACATTCCTG GCGCAACCCA TTGCGAGTGG ACAACGCTAA TGGATCCTGC GCGCAATTAC CGTATTCGCA CAGATGCCAA AGCGCACCTC GATAAGCTCG GCCTAAACGC AGAGAAAAAT ATTGTCACGC ACTGCCAATC TCACCACCGC TCTGGCTACA CCTATTTAGT TGGTAAATAT TTAGGCCTTA ACATTAAAGC TTACGACGGT AGCTGGTCGG ATTGGGGCAA CACCGATGGG TTGCCCATCG AGGGAATTTA A
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Protein sequence | MPDRLPLIAE PAAVHAFLKT HREAVSTYPV CIVDLCSEQT YRHGHIEGAI SIPVGILMSG QPPAAGKIAS QDQLSRLFSY LGTTSDTHFI VYDDEGGGWA GRFVWTLDVI GHKHVTVIDG GLIAWQGDGL PLVTEPFSPE PENYPVTIDS TQIVTAQNIV ASLGAPDFAI WDARSRAEYT GMNKFAARGG HIPGATHCEW TTLMDPARNY RIRTDAKAHL DKLGLNAEKN IVTHCQSHHR SGYTYLVGKY LGLNIKAYDG SWSDWGNTDG LPIEGI
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