Gene Sde_2678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2678 
Symbol 
ID3968497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3396977 
End bp3397807 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content53% 
IMG OID637921776 
Productfused rhodanese domain-containing protein/phosphatidylserine decarboxylase 
Protein accessionYP_528150 
Protein GI90022323 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGATA GACTGCCCTT AATCGCCGAG CCTGCTGCGG TACACGCCTT TTTAAAAACG 
CACCGAGAAG CCGTTTCCAC TTACCCTGTG TGCATTGTCG ACCTGTGCAG CGAACAAACC
TATCGCCACG GTCATATTGA AGGGGCTATC TCTATACCTG TGGGTATTTT AATGAGCGGC
CAACCGCCAG CGGCAGGTAA AATTGCGTCG CAAGACCAAC TGTCACGCTT ATTTTCTTAC
CTAGGCACCA CCAGCGATAC CCACTTTATA GTGTATGACG ACGAAGGCGG CGGCTGGGCC
GGGCGCTTCG TGTGGACGCT CGACGTAATA GGTCATAAAC ATGTTACCGT TATCGACGGA
GGCCTCATTG CGTGGCAAGG TGACGGCCTG CCGCTTGTGA CAGAACCGTT TAGCCCAGAA
CCCGAAAACT ACCCCGTAAC CATTGATTCC ACGCAAATTG TTACTGCACA AAATATCGTC
GCGTCGCTAG GCGCCCCTGA TTTCGCTATT TGGGATGCAC GCAGCCGTGC GGAATACACA
GGCATGAATA AATTCGCCGC CCGCGGGGGG CACATTCCTG GCGCAACCCA TTGCGAGTGG
ACAACGCTAA TGGATCCTGC GCGCAATTAC CGTATTCGCA CAGATGCCAA AGCGCACCTC
GATAAGCTCG GCCTAAACGC AGAGAAAAAT ATTGTCACGC ACTGCCAATC TCACCACCGC
TCTGGCTACA CCTATTTAGT TGGTAAATAT TTAGGCCTTA ACATTAAAGC TTACGACGGT
AGCTGGTCGG ATTGGGGCAA CACCGATGGG TTGCCCATCG AGGGAATTTA A
 
Protein sequence
MPDRLPLIAE PAAVHAFLKT HREAVSTYPV CIVDLCSEQT YRHGHIEGAI SIPVGILMSG 
QPPAAGKIAS QDQLSRLFSY LGTTSDTHFI VYDDEGGGWA GRFVWTLDVI GHKHVTVIDG
GLIAWQGDGL PLVTEPFSPE PENYPVTIDS TQIVTAQNIV ASLGAPDFAI WDARSRAEYT
GMNKFAARGG HIPGATHCEW TTLMDPARNY RIRTDAKAHL DKLGLNAEKN IVTHCQSHHR
SGYTYLVGKY LGLNIKAYDG SWSDWGNTDG LPIEGI