| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2674 |
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| Symbol | |
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| ID | 3968493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3391161 |
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| End bp | 3393761 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921772 |
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| Product | ribosome-binding factor A |
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| Protein accession | YP_528146 |
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| Protein GI | 90022319 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTAA GCTTAAAAAA CACTCAACTC AAAAGAAGTA TGAACATGAA CCTTAAACAC
CTCTTTCTGG TTGCTTTGGC GCTAAATATT GCTGCGTGCA ATGTAAAAGA GCCCGCGGCG
ACAAATGATA ACCACATTAG CTACCAAGCC GCTCGCGAAG CGCGCTTGGC AAAAGTTGAA
GCCGAAGTTG AACGCCTGCT GCCACTATTA ACACTAGAAG AAAAAGCCTC TTTGGTTCAT
GCGAACAGCA AATTCTCTAT CGCCTCTATC GAGCGGCTAG GCATTCACGA AATGTGGATG
TCTGATGGCC CCCACGGCGT GCGCTATCAA ATCGAACGCC ACGGCTGGGC ACCAGCAGGC
TGGACAGATG ACAACTCCAC TTACTTACCA CCGCTTACTA CCGTAGCCGC CAGCTGGAAC
CCCGAAATAG CTGCCCTTCA CGGCGATGTA CTCGGCGCAG AAGCTCGCCA CCGCCGTAAA
GATGTAATAT TAGGCCCAGG CGTAAACTTA GCTCGCCTGC CACTTTATGG TCGTAACTTT
GAATATATGG GTGAAGACCC CTTCTTGGCA TCACGTCTTG CTGTGGCAGA AATTAAAGCC
ATTCAAGAAA ATGACGTGGC CGCCTGTATC AAACATTTCG CGCTTAACAA TCAAGAGCTG
AATCGCACCG GCGTAAACGC CAAACCCGAT GAACGCACAT TACGCGAAGT GTATTTACCC
GCCTTCGAAG CCGCCGTTAA AGAAGCGGGC GTGCACACCA TAATGGGGGC CTACAATGAA
TTTCGCGGTA CCAACGCCAA CCAAAGCAAA CATTTAGTAA TGGATATTCT AAAAGGCGAA
TGGGGCTACA AAGGCGTGTT ACTCACAGAC TGGAACGTAG ATATCAACAC TTACGATGCC
GCTGTTAACG GCCTCGATAT CGAAATGGGT ACAAATGTAG ATAGCTACGA CGACTACATG
CTTGCCCAAC CAATGATCGA CATGATTAAA GCGGGCAGCA TTCCAGAGTC AGTACTTGAT
GATAAAGTTC GTCGCATACT GCGCGTGCAA CTCAGCATAG GCATGATGGA CAAATACCGC
TTATCTGGTG AGCGCAATAC TGCCAAGCAT CACGAAGCTG CACGCAAAAT TGCATCTGAA
GGTATTGTGC TACTAAAAAA TGAAAACATT CTGCCGCTAA ATAAAAACAA AATTAAAAAC
GTATTGGTGC TTGGCCCCAA CGCAGACAAA GTGCACGGTT TAGGCGGTGG CTCGTCAGAA
GTGCCAGCAC TTTATGAAAT AACCCCGTTA CAAGGGTTAA AACAGAAGCT GGGAGATAAT
GTAAACATTA CCGTTATGCG CGCACGCTAT GACGGTGTGT TAATGCCTAT CGCCAGTGAT
TATGTTACTT CTCGTCACTG GACCGGCACA CCTGCATGGA ACATGGTGCG TTACTCGGAT
GCTGCGCGCA CCCAAGCTAT TGGCGACTCC GCCATTGTTG ATTCGGCTTA TTCTTCGCCT
GCAGGCACGA CTAAAGAATA CGTCACCATG ACCGCCACAA TTAAACCGTT AAAATCGGGC
GAGCACACAC TCAAAACATC GGTGATGGGC GATTTCGAAT TAAAAATTAA CGGTAAAACC
ACAGTAAAAC ATAGCAGCAC TAGCGGCGAT GTAGTAACCC AAAAAATCGC CCTCAACGGC
GGTGAAACAT ACAGCTTCGA AATTTTATAC AGCGGCAATA AAAACTTTAC CTTGGGCTGG
GATGCACCGG GAGATTTATT TACCGCAGAA AAAGAATACA TAGCCGCCGC GAAAAAAGCG
GATGTAGTGT TTTACTTTGG CGGCCTAACC CACGGCGACG ACCGCGAAGC AATTGACCGC
CCTCACATGA AGCTGCCTAA CCATCAAGAC CCAGTTATTA GCAAAGTATT AGCTGCAAAC
CCGAACACGG TTGTATTTTT AATTGCAGGC TCTGCTGTAG AAATGCCGTG GGCCGATAAA
GCTAAAGCTA TTGTGTGGGG CTGGTATGGC GGTATGGAGG CCGGTAACGC CTACGCCGAT
ATGCTATTTG GCGATACCAA CCCCAGCGGC AAAATGCCAA TAACTTTACC AAAGGCACTG
GAAGATACTG CTCCAATCGC ACTGAATGAT TACAACCCTG TTGAATCACT CTACACCGAG
GGCGTGTTTA TTGGTTACCG CTGGTTCGAA AAACAAAACA TCGAGCCGCT ATTCCCGTTC
GGTCATGGTT TGTCTTATAC CCAGTTTAAG TACAACAATA TAAAGCTCTC TAGCGCGAAC
ATTAAAGGCG ACCAAACCGT CACCGTAAGC GCAACCATTA CCAATACTGG CAAAGTGGCC
GGCGCTGAAG TTGTACAACT GTATTTGCAT GACGAGCAAG CAAGCGTAGA ACGCCCAGCA
AAAGAACTTA AAGGTTTCCA AAAAGTGTTT TTAAAGCCGG GTGAAAGCAA AGCGGTAAAT
ATTACGCTTA ATAAACGCGC CCTTTCATTT TGGGATGAAA ACAGCAACGA CTGGCTTGCA
GAAACAGGTA AATTTAATGT GCTATTGGGC GCATCAGTAA GCGATATACG CTTACAAACT
AGCTTCCAAT ACCAGCAGTA A
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| Protein sequence | MLLSLKNTQL KRSMNMNLKH LFLVALALNI AACNVKEPAA TNDNHISYQA AREARLAKVE
AEVERLLPLL TLEEKASLVH ANSKFSIASI ERLGIHEMWM SDGPHGVRYQ IERHGWAPAG
WTDDNSTYLP PLTTVAASWN PEIAALHGDV LGAEARHRRK DVILGPGVNL ARLPLYGRNF
EYMGEDPFLA SRLAVAEIKA IQENDVAACI KHFALNNQEL NRTGVNAKPD ERTLREVYLP
AFEAAVKEAG VHTIMGAYNE FRGTNANQSK HLVMDILKGE WGYKGVLLTD WNVDINTYDA
AVNGLDIEMG TNVDSYDDYM LAQPMIDMIK AGSIPESVLD DKVRRILRVQ LSIGMMDKYR
LSGERNTAKH HEAARKIASE GIVLLKNENI LPLNKNKIKN VLVLGPNADK VHGLGGGSSE
VPALYEITPL QGLKQKLGDN VNITVMRARY DGVLMPIASD YVTSRHWTGT PAWNMVRYSD
AARTQAIGDS AIVDSAYSSP AGTTKEYVTM TATIKPLKSG EHTLKTSVMG DFELKINGKT
TVKHSSTSGD VVTQKIALNG GETYSFEILY SGNKNFTLGW DAPGDLFTAE KEYIAAAKKA
DVVFYFGGLT HGDDREAIDR PHMKLPNHQD PVISKVLAAN PNTVVFLIAG SAVEMPWADK
AKAIVWGWYG GMEAGNAYAD MLFGDTNPSG KMPITLPKAL EDTAPIALND YNPVESLYTE
GVFIGYRWFE KQNIEPLFPF GHGLSYTQFK YNNIKLSSAN IKGDQTVTVS ATITNTGKVA
GAEVVQLYLH DEQASVERPA KELKGFQKVF LKPGESKAVN ITLNKRALSF WDENSNDWLA
ETGKFNVLLG ASVSDIRLQT SFQYQQ
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