Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2672 |
Symbol | |
ID | 3968491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3388246 |
End bp | 3389748 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637921770 |
Product | ribosomal protein S15 |
Protein accession | YP_528144 |
Protein GI | 90022317 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAC CAGAACTTCC CACCAGTTTG TACACCAGTG AACAAGTCAA ACAGTTAGAT GCCCTCGCCA TTGAGCAAGC AAATATTGCC GGTATTGTAC TTATGAAGCG CGCCGGTCGC GCAGCATTTG AATTACTGCT AGAACAATGG CCCCAAGTAG AGTCTGTAGT AGTGCTATGT GGTGCCGGTA ATAATGGTGG CGATGGCTAT GTTATTGCGG CTTTGGCTGC GCAGAAAAAA CTGAATGTAC ACGCTGTGGC GATAGCAGAC CCTGCTGGCC TAAGCGGTGA CGCACTTAAG GCGTACAACT ACGCCCAGCA GGAAGGCGTA ACGGTTATAG CCGGTTCTGA GTTAAATACG GTTCAAATTG ATGCTAGTAC GGTAATAGTT GACTCGCTGT TTGGCACTGG CTTATCGCGC GAAGTAGAGG GCGATTATAG TCGTGCAATA GCTTGGGCAA ATAATTCCGC AGCCCCAGTA TTAGGGGTAG ATTTGCCTTC TGGCTTGTGT GGCAATACCG GAAAAGTGTG GGGCGACGCA ATAAAGTGTG CGGCGACTAT TACATTTATT GGTGTAAAAC GCGGTTTGTT AACCGGCCGA GGCCCAGCCT TTACCGGTGA TGTGTATTTT GATGACCTAG GTGTACCCGC TTCCATATAT GACGCCATTA AACCCGAGGT TACACGCACA TCGCGCTTGG CGCTTATGCC AAGCTTGCCA GAGCGCGAAG CCGACGCTCA TAAAGGGCAG TTTGGCTATG TGTTAGTAGT AGGTGGTGAT GTGGGTATGG GTGGCGCTGC CGCTATGGCA GGCGAAGCTG CTGCGCGCAC GGGGGCAGGG TTAACGGGTA TTGCTACCCA GCCCATTCAT GTTGCGCCTA TTCTCGCCCG TTGCCCAGAG CTTATGGTAA TAGGTGTGGC GTCAGGCCAG GCTATCGAGC CTGTATTGGC TAAACCAACG GTTGTTGTAT TGGGCCCAGG CCTTGGGCGT GACTCGTGGT CGGAGCAAAT GCTGCAGCAA GCAACACTTA CAGACTTACC CTTGGTAATG GATGCCGACG CATTGAATTT GTTGGCAGAA GGGCGCGTAG TGCGAAAAAC GCAACGCGAT AACTGGGTGC TAACGCCGCA CCCAGGAGAG GCGGCGCGCC TACTAGACTG CTCTGTGGCA GAAATTCAAG CCGATAGGTT TGCCGCAGCC CGCGCTATTC AAACTAAATA TGGCGGTGTA GTCGTTTTGA AAGGCGCTGG AACCATTATT GCCGGTGCGG ATCAATTAGT GGTGGCGAAT GTTGGCAACC CAGGAATGGC AACCGGTGGC ATGGGCGACG TACTTAGTGG CGTGATTGGC GCCTTGATTG CGCAGGGTTT AACCTTATTT GAAGCTGCTC AGTTGGGCGT GTGCGCCCAC GGTGATGCCG CCGATTTGGC CGTGCAAGAA GCGGGTGTGC GTGGTGTAAT GGCGACCGAT TTAATTCCAT TTATTAGGGA GTTGTTAAAC TAG
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Protein sequence | MTAPELPTSL YTSEQVKQLD ALAIEQANIA GIVLMKRAGR AAFELLLEQW PQVESVVVLC GAGNNGGDGY VIAALAAQKK LNVHAVAIAD PAGLSGDALK AYNYAQQEGV TVIAGSELNT VQIDASTVIV DSLFGTGLSR EVEGDYSRAI AWANNSAAPV LGVDLPSGLC GNTGKVWGDA IKCAATITFI GVKRGLLTGR GPAFTGDVYF DDLGVPASIY DAIKPEVTRT SRLALMPSLP EREADAHKGQ FGYVLVVGGD VGMGGAAAMA GEAAARTGAG LTGIATQPIH VAPILARCPE LMVIGVASGQ AIEPVLAKPT VVVLGPGLGR DSWSEQMLQQ ATLTDLPLVM DADALNLLAE GRVVRKTQRD NWVLTPHPGE AARLLDCSVA EIQADRFAAA RAIQTKYGGV VVLKGAGTII AGADQLVVAN VGNPGMATGG MGDVLSGVIG ALIAQGLTLF EAAQLGVCAH GDAADLAVQE AGVRGVMATD LIPFIRELLN
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