| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2667 |
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| Symbol | |
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| ID | 3968486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3383046 |
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| End bp | 3383306 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921765 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_528139 |
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| Protein GI | 90022312 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAAAG GGCACAGCTT ACAAGACCCT TACCTCAACG TCCTGCGCAA AGAGCGCATT
CCTGTATCCA TCTACCTTGT AAATGGAATC AAGTTGCAAG GACAAGTAGA GTCATTTGAC
CAGTTTGTAG TTTTATTGAA AAACACCGTA AGCCAAATGG TTTACAAGCA CGCTATATCC
ACTGTTGTTC CCTCTCGTCC AGTTCGCGTT CCTTTATTGA ATGCAGATGG CACGTCCGCA
GAGGACGAAA ACGGGGGTTA A
|
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| Protein sequence | MSKGHSLQDP YLNVLRKERI PVSIYLVNGI KLQGQVESFD QFVVLLKNTV SQMVYKHAIS
TVVPSRPVRV PLLNADGTSA EDENGG
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