Gene Sde_2666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2666 
Symbol 
ID3968485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3381708 
End bp3383033 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content52% 
IMG OID637921764 
Productputative GTP-binding protein 
Protein accessionYP_528138 
Protein GI90022311 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTTTTG ATAGACCTGA ATCCGGTGAG CTAGCTGTTC TAGTTCACCT GGAAATTTCC 
CAAGCAGAAC AGTCTGAAGA TCCTCGAGAG TTTGAAGAAC TCGTCCTCTC GGCCGGTGGC
GACCCCGTAG ACTTCCTAAC CGGTAGTCGA TCAACCCCCA GCTCCAAGTA CTTTGTTGGA
ACGGGTAAGT TGGAAGAGCT GCAGGCCATG GTTAAGCAGC ACAATGCTGA GTTAGTGATA
TTCAACCATC AACTTACTCC CAGCCAAGAG CGCAATATAG AGCATGCGCT CGGCTGTCGT
GTGCTTGACC GAACCGGATT AATTCTAGAT ATTTTTGCCC AGCGCGCCCG CACTCATGAA
GGTAAACTTC AGGTGGAGCT GGCGCAGCTG CAGCATATGT CTACTCGATT AATTCGCGGG
TGGACTCACT TGGAGCGCCA GAAAGGCGGC ATAGGCATGC GGGGGCCGGG TGAAACCCAG
CTCGAAACCG ACCGCCGGCT TCTTCGCGCC CGTATAAAAT CTATTCACAA ACGTTTAGAT
CGCGTACGCA AGCAGCGCGA GCAAGGCAGA CGCGCGCGCA ATCGAGCAGA AATTCCTACG
CTTTCTTTGG TGGGTTACAC CAACGCCGGC AAATCTACGC TGTTTAACGC CATTACAGAT
GCCGGTGTAT ACGCCGAAGA CAAGCTATTC GCTACCTTAG ACCCCACCAT GCGTCGCATC
GGCTTGCGTG ATGTTGGCCC AGCAATATTG GCCGATACCG TAGGTTTTAT TAGCAATTTG
CCCCACCGTT TAGTGGAGGC GTTTCGCGCT ACCTTAGAAG AGGCTGCAAG TGCTGATATT
CTTCTGCACG TAGTGGATGC CGCCGATGAC GAGCGCGCGC GCAATATTGA ACAGGTTAAA
TTAGTGTTGA ACGAAATTGG CGCTGGCGAT TTACCGGTGT TAATGGTGCA CAACAAAATA
GACTTGCTAT CCAATGTTGA TGCGCGAATA GATCGTGATG ATTTAGGCAA GCCCGTTGCC
GTGTGGCTGT CGGCGCAGTC TGGTGCGGGT ATAGAGCAAT TGATGGAGGC AATAACAGAG
CTTCTATCCG ATAACATTGT TCACCAAAAA GTATTGTTGC CAGCATCAAT GGGGAGCTTG
CGGGCGCGCT TGTACCGCCA AAACGCAGTG GTTGGCGAAA GTCACCAAAG CGATGGTACA
TGTGTTATCG AAATACGATT GCCCGAGGCG GATTTGCATC GTATGCTTTC GGCCGAAAGT
CTCACCATCA ACGATTTGTG TTGGGCGCAG GACGACGACC AAGCTTCAAG TGTTGTCGCC
GGCTAA
 
Protein sequence
MFFDRPESGE LAVLVHLEIS QAEQSEDPRE FEELVLSAGG DPVDFLTGSR STPSSKYFVG 
TGKLEELQAM VKQHNAELVI FNHQLTPSQE RNIEHALGCR VLDRTGLILD IFAQRARTHE
GKLQVELAQL QHMSTRLIRG WTHLERQKGG IGMRGPGETQ LETDRRLLRA RIKSIHKRLD
RVRKQREQGR RARNRAEIPT LSLVGYTNAG KSTLFNAITD AGVYAEDKLF ATLDPTMRRI
GLRDVGPAIL ADTVGFISNL PHRLVEAFRA TLEEAASADI LLHVVDAADD ERARNIEQVK
LVLNEIGAGD LPVLMVHNKI DLLSNVDARI DRDDLGKPVA VWLSAQSGAG IEQLMEAITE
LLSDNIVHQK VLLPASMGSL RARLYRQNAV VGESHQSDGT CVIEIRLPEA DLHRMLSAES
LTINDLCWAQ DDDQASSVVA G