Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2665 |
Symbol | |
ID | 3968484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3380498 |
End bp | 3381658 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637921763 |
Product | heat shock protein HslU |
Protein accession | YP_528137 |
Protein GI | 90022310 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.288159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTGGA ATGAACCGGG TGGTAACAAC GATAAAGACC CTTGGGGTGG AAATCGTGGT AACGACGGCC CACCGGACCT AGACGAAGTT ATACGTAACT TTCAAAACAA AATAAGCGGC TTATTCGGCG GTAAAGGTGG CGGAAACGGC ACCAATAATG GACGCAACGA AGGTGGCTTT AATGGCACTA TTCTTATTTT CGCGTTAGTT GTTGTGGCTA TTATTTATGT GTTTGCCGGT ATTTATCAGG TAGACCAAAA AGAGCGCGCT GTAGTATTGC ACCTCGGTAA ATATAGCGAG ACTAAAGGCC CAGGCTTGCA CTGGAACCCA CCGTTAATCG ACTCTGTAAG CAAAGTGGAT TCACTGAGTT TGCAGGAGTG GAGCACGGGT CAACAAATGC TTACCAAAGA TTTGAATATT GTGGATATTC GTATGTCTGT TCAGTATTCA CGTATCGATC CTAAAGCTTA CCTTTTAGAA GTGCGTGACC CAGAGATGAG CTTGCAGCAA GCGGCCAACA GTGCCTTGCG CCATGTGGTT GGTTCATCAC CTATGCACAA CGTGCTTACC GAAGGCCGTG AGCAAATTGC AGTTGAAGTA CGTGAGCTGT TGCAATTGTA TTTAGATAAC TACAAAACCG GCATCAACGT TGACAAGGTG AACATCGAAG AAGCCGATCC CCCCAAAGAG GTTCAATCTG CGTTTGATGA TGTGAGTAAG GCGCGCGAAG ACGAAGAGCG TCTTCAAAAC GAAGCTCAAA CCTATGCCAA CGGTATTATT CCTAAGGCGC GTGGTGAAGC TCAGCGTGTT ATCGAGCAAG CTACAGCTTA TAAAGAGCAA GTTATCGCAC AGGCAGAGGG TGAGGCGAAG CGTTTTGAAT ACTTGTTAGC TGAGTATAAA AAGGCTCCAG AAGTTACCCG TCGTCGTTTG TACATAGATA CTGTGCAAGA AGTGATGGAA AACAGCTCCA AGGTAATGGT GGATGTTGAG GGCGGTAACA ATATGTTCTA CATGCCTCTC GATCAGATAG TTAAGGCTAC GCGTACTTCA ACCGCTAAGG CGGCTACACC GCAAGACGTG GACGCGATAG TGGACCAAGT AATGAATCAA TTGCGCAGCG AAGCAGCGGC ACAGCAATCT CGTCGCAGGG AGTTACGTTA A
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Protein sequence | MAWNEPGGNN DKDPWGGNRG NDGPPDLDEV IRNFQNKISG LFGGKGGGNG TNNGRNEGGF NGTILIFALV VVAIIYVFAG IYQVDQKERA VVLHLGKYSE TKGPGLHWNP PLIDSVSKVD SLSLQEWSTG QQMLTKDLNI VDIRMSVQYS RIDPKAYLLE VRDPEMSLQQ AANSALRHVV GSSPMHNVLT EGREQIAVEV RELLQLYLDN YKTGINVDKV NIEEADPPKE VQSAFDDVSK AREDEERLQN EAQTYANGII PKARGEAQRV IEQATAYKEQ VIAQAEGEAK RFEYLLAEYK KAPEVTRRRL YIDTVQEVME NSSKVMVDVE GGNNMFYMPL DQIVKATRTS TAKAATPQDV DAIVDQVMNQ LRSEAAAQQS RRRELR
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