| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2664 |
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| Symbol | |
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| ID | 3968483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3379620 |
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| End bp | 3380495 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921762 |
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| Product | protease subunit HflC |
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| Protein accession | YP_528136 |
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| Protein GI | 90022309 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCTA AAACATTGTT TATATTGGCC ACCTTAGCAA TTGTCGCAAT TGTTGCGTCT
AAATCGCTGT ATGTGGTGAA CGAAACTCAG CGCGCGGTAC TGTTAAAGTT TGGTGAGGTG
GTTGAGTCAG ATTTACAGCC GGGCTTACAC GCTAAAGTGC CCTTGATGCA CCAAGTTAAG
ATTTTTGATG CGCGAGTACT TACGTTGGAT TCTCGTGCGG CTAAGTTTCT TACCGTAGAG
AAGAAAGCAG TAGAGGTGGA TTCATTTGCC AAGTGGAGAA TTGTAGATGT AAGCCGATTC
TATACCTCTA CCAACGGTGA CGAGATACGT GCACAGCGCT TACTCGAGCA GCGTATTAAC
GAAGGTTTAC GGAACGAGTT CGCGCAGCGT TCACTGCAAG AAGTGGTGAG TGGCGAGCGT
GCAGTGTTGA TGACCAACTT AACCGAACAG CTTAACGGCT TCACCAAAGA ATCTTTAGGT
GTAGAAGTTG TCGATGTTCG CGTGAAGAAA ATCGACCTGC CGAATACGGT GAGTGGGCCT
ATCTTTAGTC GTATGGCTGC TGAGCGTCAG CGTGAAGCGC AAGAGCACAG AGCGAAAGGT
GGTGAGCAAG CTGCCATCAT TCGGGCGGAT GCCGAGCGTC AAAAAACTAT CCTCGAAGCG
CAGGCGTATA AAGAGTCTGA ATTACTGCGC GGTGAGGGCG ATGCGAAAGC GGCTGCTATT
TATGCATCTG CTTACGACAA AGACCCAGAG TTCTATGCGT TTGTTCGCAG CCTTACAGCT
TACCGCAGCA CCTTTAGCGG CAAGCAAGAT GTATTGGTGT TATCACCTGA AAGTGAGTTC
TTTGAGTACT TCAACAGTAC AAATAAGAAA AAGTAA
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| Protein sequence | MNAKTLFILA TLAIVAIVAS KSLYVVNETQ RAVLLKFGEV VESDLQPGLH AKVPLMHQVK
IFDARVLTLD SRAAKFLTVE KKAVEVDSFA KWRIVDVSRF YTSTNGDEIR AQRLLEQRIN
EGLRNEFAQR SLQEVVSGER AVLMTNLTEQ LNGFTKESLG VEVVDVRVKK IDLPNTVSGP
IFSRMAAERQ REAQEHRAKG GEQAAIIRAD AERQKTILEA QAYKESELLR GEGDAKAAAI
YASAYDKDPE FYAFVRSLTA YRSTFSGKQD VLVLSPESEF FEYFNSTNKK K
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