Gene Sde_2653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2653 
Symbol 
ID3968511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3361173 
End bp3363203 
Gene Length2031 bp 
Protein Length676 aa 
Translation table11 
GC content47% 
IMG OID637921751 
Producthypothetical protein 
Protein accessionYP_528125 
Protein GI90022298 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.135557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0988839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TAAACACGAC TAAAATTTTA CTTAGCGCAG CCGTTGCTGC ATCACTAAGT 
GCATGTGGCG GCAGCGATAG CAACAGTAAA AGCAGCGCAA ACAACGCGCC AACACACAAC
GGCAATCTAT CGGTTACGGT TTCGGAAAAC GACCGCGCAA GTACAATTAA CTTATTGAAC
GGCGCAACAG ATTTAGATGC CGGCGATGCA TTGCGTGTTA GAGACCTAAC AACAACCGAA
GCTGATCTAT CTGGTGTAAC AGAAAACTTT TTCCAAATTA CGGTTACACC TAGCGCCTAC
AAAGACTCAC TAGACAGCGG CGAAACCAAA GAAATCGTAT ACACTTACTC GGTGAGCGAT
GGTAAACAAG ATACTCCACG CACACTCACC ATAGCAATTG AAGGCTATGA TGAAGCACCA
GTGTTTAGCA ATCTTACTCG CACCTTTAGT GAAGAAGCAG GCTCGCGCAC TTACAATTTA
CTTGAAGGCG CAACAGACGC AGATGGTGAA ACACTTAGCG TTGCAAACTT TAGCCAAGCT
GAAACCAATA TTGACGGTGC AGCAACCTAT GCAAACGGCA GCGTAACAAT TGATTCCTCC
GTTTTTGCCG ATGACATAAA AGGCGGCGAC ACGGTTACAT TTGTATTCAA CTATGAAATA
GCCGATCACA ACCACAGCTT GCCACGCACT CTCACGGTAA ATGTTACTGG TGTATCAACA
GAGCCAGAAC CACCAACAGT GAACGACACC ATTACAGCAA CAATGAGCAC AGCCGACAGC
CAAGTAATGG TAGACCTTGT CGCATCGCCA GAAATTATCG ACTGGAACGG CGATGACGTT
ACTGCAGACC TCTCAACCCT TACACCGGTT GGCGATGCGC CTGCGTTTAA CTTTGCTTTA
TCTAGCGGTA ACACTTTAGT AGTAGAACCT GTTGCCTTCT ACAGCCGCCT AGCCGAAGCA
GAAACTAAAA GCTTTGCTTA CACCTATACC GTTTCTGACC CTGGTGGGTT AACAGCCCAA
GCGACTGTTT CACTTAGCGT AACCAAAGAT ACCGTTGCTG CACATAACGT AATGCCAAAC
GCAAGTTTTG AAGATGGCAC TATGGCAGGT TGGACACAAG TACCGACACA GGCAGATGGC
ACAGAAGTAG AAAACTTTGC CGCAGTAGTA ACGGACGCAG CTAACGCCAA GCAGGGCACC
AATTACTTGC AAGTAACTGG TGATGTAAAG CTCTCTTACG ATTTAACCGG CCTGCTCGAA
CAAGGTAGCA GCTACTACGT AGAGCTACCT GCACGCGATA AAAGTTGGGG GAACTGGTAC
GGTAGCATTA GCGAAGGCCT GACCCTACTT ACAGAACGCT TCCGCTTTTC TGATCACGGC
TGGAACCCCG GTATCTACCT AAGCCACACA GGAACATTTA CAGTAGATGA TCGCTATATA
GAACCGGCTC TAAAAATTGA ATCGGCTGGC AACCTTAAGC TAGATGATAT TCGCTTAGTA
AAATACGCAT TCGAACAAGC GAATAATATT CTTAGTGAGC AAGACAGTAC GTTTGAAGAT
GGCAGCGCTG GTAATTGGGT TTTAGGCGGT AATTCCACCA TCTCAAACAC TACGGTTATT
GATGGAGACT ACAGCATTTA CGCAACTGGT GGCGGCGCAA ACGATATTGT TATGCCCGCT
GGCAGCATCC AAAACGGTAA ACGTTACTTG CTAGAGTTCG ACATTTACAG CCCTGATTTT
GCACCCGACA ACCACCCTAC TCGCGCTTGG ATTTTAGATT CAACCGCAGT TGATGGAAGC
GGCAACCCCA TAAATACCAA CGCAGAAGTA TTTGCTTCTA CCGCTGAATG GCGAACCATC
CGCTTCTTGG ATGCCGCGAC TGTGCGCTGG TCAATGATTT TCGATATTGA TCACACCAGC
CATTTAGATG ATTGGGCAAC CCGCGAAACC ATGCTGCGTT TAGAAACAAA TATTTGGGGC
CAAGGTTATA CCTACGCGAT TGACAACGTA CGGTTAATAG AAATTCCTTA A
 
Protein sequence
MKKLNTTKIL LSAAVAASLS ACGGSDSNSK SSANNAPTHN GNLSVTVSEN DRASTINLLN 
GATDLDAGDA LRVRDLTTTE ADLSGVTENF FQITVTPSAY KDSLDSGETK EIVYTYSVSD
GKQDTPRTLT IAIEGYDEAP VFSNLTRTFS EEAGSRTYNL LEGATDADGE TLSVANFSQA
ETNIDGAATY ANGSVTIDSS VFADDIKGGD TVTFVFNYEI ADHNHSLPRT LTVNVTGVST
EPEPPTVNDT ITATMSTADS QVMVDLVASP EIIDWNGDDV TADLSTLTPV GDAPAFNFAL
SSGNTLVVEP VAFYSRLAEA ETKSFAYTYT VSDPGGLTAQ ATVSLSVTKD TVAAHNVMPN
ASFEDGTMAG WTQVPTQADG TEVENFAAVV TDAANAKQGT NYLQVTGDVK LSYDLTGLLE
QGSSYYVELP ARDKSWGNWY GSISEGLTLL TERFRFSDHG WNPGIYLSHT GTFTVDDRYI
EPALKIESAG NLKLDDIRLV KYAFEQANNI LSEQDSTFED GSAGNWVLGG NSTISNTTVI
DGDYSIYATG GGANDIVMPA GSIQNGKRYL LEFDIYSPDF APDNHPTRAW ILDSTAVDGS
GNPINTNAEV FASTAEWRTI RFLDAATVRW SMIFDIDHTS HLDDWATRET MLRLETNIWG
QGYTYAIDNV RLIEIP