Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2653 |
Symbol | |
ID | 3968511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3361173 |
End bp | 3363203 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637921751 |
Product | hypothetical protein |
Protein accession | YP_528125 |
Protein GI | 90022298 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.135557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0988839 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT TAAACACGAC TAAAATTTTA CTTAGCGCAG CCGTTGCTGC ATCACTAAGT GCATGTGGCG GCAGCGATAG CAACAGTAAA AGCAGCGCAA ACAACGCGCC AACACACAAC GGCAATCTAT CGGTTACGGT TTCGGAAAAC GACCGCGCAA GTACAATTAA CTTATTGAAC GGCGCAACAG ATTTAGATGC CGGCGATGCA TTGCGTGTTA GAGACCTAAC AACAACCGAA GCTGATCTAT CTGGTGTAAC AGAAAACTTT TTCCAAATTA CGGTTACACC TAGCGCCTAC AAAGACTCAC TAGACAGCGG CGAAACCAAA GAAATCGTAT ACACTTACTC GGTGAGCGAT GGTAAACAAG ATACTCCACG CACACTCACC ATAGCAATTG AAGGCTATGA TGAAGCACCA GTGTTTAGCA ATCTTACTCG CACCTTTAGT GAAGAAGCAG GCTCGCGCAC TTACAATTTA CTTGAAGGCG CAACAGACGC AGATGGTGAA ACACTTAGCG TTGCAAACTT TAGCCAAGCT GAAACCAATA TTGACGGTGC AGCAACCTAT GCAAACGGCA GCGTAACAAT TGATTCCTCC GTTTTTGCCG ATGACATAAA AGGCGGCGAC ACGGTTACAT TTGTATTCAA CTATGAAATA GCCGATCACA ACCACAGCTT GCCACGCACT CTCACGGTAA ATGTTACTGG TGTATCAACA GAGCCAGAAC CACCAACAGT GAACGACACC ATTACAGCAA CAATGAGCAC AGCCGACAGC CAAGTAATGG TAGACCTTGT CGCATCGCCA GAAATTATCG ACTGGAACGG CGATGACGTT ACTGCAGACC TCTCAACCCT TACACCGGTT GGCGATGCGC CTGCGTTTAA CTTTGCTTTA TCTAGCGGTA ACACTTTAGT AGTAGAACCT GTTGCCTTCT ACAGCCGCCT AGCCGAAGCA GAAACTAAAA GCTTTGCTTA CACCTATACC GTTTCTGACC CTGGTGGGTT AACAGCCCAA GCGACTGTTT CACTTAGCGT AACCAAAGAT ACCGTTGCTG CACATAACGT AATGCCAAAC GCAAGTTTTG AAGATGGCAC TATGGCAGGT TGGACACAAG TACCGACACA GGCAGATGGC ACAGAAGTAG AAAACTTTGC CGCAGTAGTA ACGGACGCAG CTAACGCCAA GCAGGGCACC AATTACTTGC AAGTAACTGG TGATGTAAAG CTCTCTTACG ATTTAACCGG CCTGCTCGAA CAAGGTAGCA GCTACTACGT AGAGCTACCT GCACGCGATA AAAGTTGGGG GAACTGGTAC GGTAGCATTA GCGAAGGCCT GACCCTACTT ACAGAACGCT TCCGCTTTTC TGATCACGGC TGGAACCCCG GTATCTACCT AAGCCACACA GGAACATTTA CAGTAGATGA TCGCTATATA GAACCGGCTC TAAAAATTGA ATCGGCTGGC AACCTTAAGC TAGATGATAT TCGCTTAGTA AAATACGCAT TCGAACAAGC GAATAATATT CTTAGTGAGC AAGACAGTAC GTTTGAAGAT GGCAGCGCTG GTAATTGGGT TTTAGGCGGT AATTCCACCA TCTCAAACAC TACGGTTATT GATGGAGACT ACAGCATTTA CGCAACTGGT GGCGGCGCAA ACGATATTGT TATGCCCGCT GGCAGCATCC AAAACGGTAA ACGTTACTTG CTAGAGTTCG ACATTTACAG CCCTGATTTT GCACCCGACA ACCACCCTAC TCGCGCTTGG ATTTTAGATT CAACCGCAGT TGATGGAAGC GGCAACCCCA TAAATACCAA CGCAGAAGTA TTTGCTTCTA CCGCTGAATG GCGAACCATC CGCTTCTTGG ATGCCGCGAC TGTGCGCTGG TCAATGATTT TCGATATTGA TCACACCAGC CATTTAGATG ATTGGGCAAC CCGCGAAACC ATGCTGCGTT TAGAAACAAA TATTTGGGGC CAAGGTTATA CCTACGCGAT TGACAACGTA CGGTTAATAG AAATTCCTTA A
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Protein sequence | MKKLNTTKIL LSAAVAASLS ACGGSDSNSK SSANNAPTHN GNLSVTVSEN DRASTINLLN GATDLDAGDA LRVRDLTTTE ADLSGVTENF FQITVTPSAY KDSLDSGETK EIVYTYSVSD GKQDTPRTLT IAIEGYDEAP VFSNLTRTFS EEAGSRTYNL LEGATDADGE TLSVANFSQA ETNIDGAATY ANGSVTIDSS VFADDIKGGD TVTFVFNYEI ADHNHSLPRT LTVNVTGVST EPEPPTVNDT ITATMSTADS QVMVDLVASP EIIDWNGDDV TADLSTLTPV GDAPAFNFAL SSGNTLVVEP VAFYSRLAEA ETKSFAYTYT VSDPGGLTAQ ATVSLSVTKD TVAAHNVMPN ASFEDGTMAG WTQVPTQADG TEVENFAAVV TDAANAKQGT NYLQVTGDVK LSYDLTGLLE QGSSYYVELP ARDKSWGNWY GSISEGLTLL TERFRFSDHG WNPGIYLSHT GTFTVDDRYI EPALKIESAG NLKLDDIRLV KYAFEQANNI LSEQDSTFED GSAGNWVLGG NSTISNTTVI DGDYSIYATG GGANDIVMPA GSIQNGKRYL LEFDIYSPDF APDNHPTRAW ILDSTAVDGS GNPINTNAEV FASTAEWRTI RFLDAATVRW SMIFDIDHTS HLDDWATRET MLRLETNIWG QGYTYAIDNV RLIEIP
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