| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2647 |
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| Symbol | |
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| ID | 3968505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3348164 |
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| End bp | 3349180 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921745 |
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| Product | dehydrogenase |
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| Protein accession | YP_528119 |
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| Protein GI | 90022292 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0114296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.147618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTG CACAATATGC GGGAAATAAA AGTTTTAACG TTGTAGATGG CGCTAAAGTG
CCCCCCGCAG AAGGCGAGGT GTGTCTACAG GTTGGTTACA CTGGTATATG CGGTACCGAT
ATGCATATTT ACCACGGGGT TATGGATCAG CGTGTTTCTA TTCCACAAAT TATCGGCCAT
GAAATGTCGG GTACGGTAGT GGAAGTAGGC GCAGGGGTGA CCGACTATAC AGTAGGCGAC
CGCGTAGTTG TTCGGCCTTT AGATTACTGT GGCGATTGCC CAGCGTGTAA TGCAGGGCAT
TCTCATGTGT GCCATAACCT AAAGTTTATG GGCATAGATA GCCCAGGGGC CTTCCAAAGC
TACTGGACAG TTAAAGCGCG CACGCTTCAC GCATTGCCAG ACAATGTGAG CTTAAAGCAA
GGTGCACTAA TCGAGCCGCT GTCTGTTGCC TGTCACGATG TAGCGCGCAC GCGTTTGCAA
GCGGGTGAAA AAGCATTAGT TATTGGTGGT GGCCCAATCG GTCAACTCGT AGCCTTAGTA
GCAAAAAGTG TTGGCGCAGA GGTAATGATT TCTGAGGTGA GCGAAGCGCG CCTAAAGTTT
GCCGCAGAGC GCGGTATTAA AACCGTTAAC CCCGTAACCG ACGATATTGA AGCGGTAGTA
AAAGAGTGGA CTGGTGGTAA AGGCGCGGAC GCAGTATTTG AAGTATCTGG CGTGGCTGCA
GCAGTAGAAA CCATGACCAA AGTTGCCGCA GTGCGTGGTC GTATTTGTAT GGTGGCAATC
CATTCGCAAA AGCCACAGGT AGACCTGTTT CAGTTCTTCT GGAAAGAGCT AGAACTGCTG
GGCGCGCGAG TATACGAATC GGCGGACTTC GAGCACGCTA TTGAGCTTGT GGCCAGCGGC
AAAATTGATG TGGATTCATT TATTAGCTCG GTAACCAGTT TGAACGATAT AGGTACCGCA
TTTGCCAGCA TGGATAACAA CCCAGCCGGA ATGAAAGCGT TAGTGGAGTG TAATTAA
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| Protein sequence | MKAAQYAGNK SFNVVDGAKV PPAEGEVCLQ VGYTGICGTD MHIYHGVMDQ RVSIPQIIGH
EMSGTVVEVG AGVTDYTVGD RVVVRPLDYC GDCPACNAGH SHVCHNLKFM GIDSPGAFQS
YWTVKARTLH ALPDNVSLKQ GALIEPLSVA CHDVARTRLQ AGEKALVIGG GPIGQLVALV
AKSVGAEVMI SEVSEARLKF AAERGIKTVN PVTDDIEAVV KEWTGGKGAD AVFEVSGVAA
AVETMTKVAA VRGRICMVAI HSQKPQVDLF QFFWKELELL GARVYESADF EHAIELVASG
KIDVDSFISS VTSLNDIGTA FASMDNNPAG MKALVECN
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