| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2646 |
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| Symbol | |
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| ID | 3968504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3347386 |
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| End bp | 3348162 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921744 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_528118 |
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| Protein GI | 90022291 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.229989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.216925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAGCC CAGTATTAAA CAGCTTTAAT TTGGAAGGTA AAGTCGCGCT GGTTACAGGT
TGTAAGCGTG GCATAGGTAA AGCAATGGCA GTTGCATTGG CACAAGCTGG CGTAGATGTA
ATTGGTGTGT CGGCAAGCCT AGAAAGCGAA GGCTCAGACG TTGCAAAGGC GGTAGAGGCA
ACCGGCAGAA AATTTAGCGC ATATAAATGT GACTTTAATA GCCGCGAAGC CATCTATACT
TTTATCGAGC AAGTAAAAGC GGCGCACCCA GTTATTGATA TTCTTGTAAA CAACGCGGGT
ACCATATTGC GTGCACCGGC AGCCGAGCAT GGCGACAGCC TGTGGGATGA GGTTATTAAC
GTAAACCTTA ACTCGCAATT TATTCTAAGC CGCGAGCTGG GCCGCGAAAT GGTTAAGCGC
GGTTCTGGCA AGGTGATTTT TACTGCTTCG TTACTTACCT TTCAGGGTGG CATTACAGTG
CCGGGCTATG CGGCAAGTAA GGGGGCAATT GGTCAACTTA CTAAAGCATT GGCAAATGAG
TGGGCGGGCA GCGGTGTAAA TGTTAACGCA ATTGCGCCGG GTTATATCGC AACCGATAAC
ACACAAGCGT TGCGCGACGA CCCAGAGCGT GCCACTTCTA TTTTGAGTCG TATTCCACAA
AACCGCTGGG GTAAGCCAGA AGATTTCGCA GGTCCTGTGG TGTTTTTAGC TTCTGAAGCC
GCTAGCTATG TTAACGGTAG CGTGATGGTC GTCGATGGCG GCTGGATGGG GAGATAA
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| Protein sequence | MTSPVLNSFN LEGKVALVTG CKRGIGKAMA VALAQAGVDV IGVSASLESE GSDVAKAVEA
TGRKFSAYKC DFNSREAIYT FIEQVKAAHP VIDILVNNAG TILRAPAAEH GDSLWDEVIN
VNLNSQFILS RELGREMVKR GSGKVIFTAS LLTFQGGITV PGYAASKGAI GQLTKALANE
WAGSGVNVNA IAPGYIATDN TQALRDDPER ATSILSRIPQ NRWGKPEDFA GPVVFLASEA
ASYVNGSVMV VDGGWMGR
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