Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2644 |
Symbol | |
ID | 3968502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3343354 |
End bp | 3345735 |
Gene Length | 2382 bp |
Protein Length | 793 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637921742 |
Product | GTPase EngC |
Protein accession | YP_528116 |
Protein GI | 90022289 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.489396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.285653 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTGCAA TTGGAGGTCT CGTGAAAATA AATATCTCTT TTATCCCACT TTTTGTTATT TCCGCTTCAA TTTTTATTGG CGCGTGTAAT TCAAGTAAGC TTGAATCGGG TGTAGACTCA AATAATATTT CGCCCGTTAT GTTATTCGAT TTTGAAAACG ATCAAGTCCC TTCAAATATT CATTTTTTAA ATGCGCGTGC AAGTATAGAA ACCTATACCG GTATAAATGG CGAGCCGAGT AAAGGGTTAA AGTTGGCGAT GCAGTCCAAG CAGCACAGTT ATACTGGCCT TGCCATTGTG CCAGAGCAGC CTTGGGATTG GAGCGAGTTT ACCTCTGCTA GCTTGTATTT CGATATAGTC AGTGTTGGCG ATCATTCCAC ACAATTTTAT TTAGATGTTA CCGACCAAAA TGGCGCCGTG TTTACCCGCA GTATTGATAT TCCAGTGGGT AAAATGCAAT CGTACTACGC CAAGTTAAGC GGTCACGATT TAGAAGTGCC CGATAGTGGA GACGTTAACG ATTTAAACCT CGCCTCTGGC TTGCGTTCTA ACCCGCCTAC ATGGACATCT GACGATAGGC AGTTTGTTTG GATGTGGGGA GTGAAAAATT TAGATTTGTC GGGCATTGCT AAAATATCGC TAAGTGTGCA AAGCGCAATG CACGATAAAA CAGTTATTAT CGATAATATT CGTATTCAAC CCAACCCGCC GCAAGATGAA AACTTCCTTG TCGGTTTGGT AGACGAGTTT GGCCAAAACG CCAAAGTTGA TTACAAGGGT AAAATCCATA GTTTAGAAGA ATTGCATGCA GCGCGCGATG TGGAACTGGC CGAGCTTGAT GGCAAGCCAA TGCCTAGTCG CTCTAAGTTT GGCGGTTGGT TGGCCGGCCC CAAGCTAAAA GCTACAGGGT ACTTTCGCAC AGAAAAAATT AACGGTAAAT GGATGCTAGT AGACCCAGAA GGGTACCCTT ACTTTGCTAC GGGTTTAGAC ATTATTCGCC TATCTAATTC ATCTACCATG ACTGGTTACG ATTACGATCA AGCTACTGTT GCTCAGCGCT CTGCCGACGA TGTAACACCT GAAGACTCAA AAGGTTTAAT GGCAGTGAGC GAAAAATCAT TTGCTACGCG CCACCTAGCA TCGCCAACAC GAGCGGCAAT GTTTAACTGG TTGCCAGATT ACGATCACCC TCTCGCAAAT CATTATAACT ACCGTCGCTC TGCGCATTCC GGCCCACTGA AACGCGGTGA AGCCTACAGC TTCTACAGTG CCAACCTTGA GCGTAAATAC GGTGAAACTT ACCCCGGTTC TTACTTGGAT AAGTGGCGCG AAGTAACGGT AGACAGAATG CTAAACTGGG GCTTTACCTC GCTAGGCAAC TGGACTGACC CAGCATATTA CGACAACAAT CGCATACCGT TTTTCGCGAA TGGTTGGGTA ATAGGGGATT TTAAAACCGT ATCTAGCGGT GCGGATTTTT GGGGCGCAAT GCCAGATGTA TTCGACCCAG AATTTAAAGT GCGCGCTATG GAAACGGCAC GCGTGGTTTC AGAAGAAATT AAAAATAGCC CTTGGTGCGT AGGGGTATTT ATCGATAACG AAAAAAGCTT CGGTCGCCCC GATTCCGATA AGGCGCAATA CGGTATTCCC ATTCATACCC TCGGTCGCCC AAGCGAAGGT GTGCCTACTA GGCAGGCGTT TAGTAAGCTG CTTAAAGCCA AATACAAAAC TATAGCCGCG TTAAACAATG CCTGGGGGTT AAAGCTTAGT TCTTGGGCTG AGTTTGATTT GGGCGTAGAT GTAAAAGCGC TGCCGGTAAC CGATACTCTG CGCGCAGATT ACTCAATGTT ACTTTCGGCC TATGCGGACC AATATTTTAA GGTGGTACAC GGCGCGGTTG AACATTACAT GCCGAACCAC TTGTATTTAG GCGCACGCTT TCCTGATTGG GGAATGCCAA TGGAGGTAGT GAAAGCTGCC GCAAAATACG CCGATGTGGT TAGCTATAAT TCCTACAAAG AGGGCTTGCC TAAGCAGAAG TGGGCTTTTT TAGCAGAGCT AGATAAGCCG AGTATAATCG GTGAGTTTCA CATAGGTGCT ATGGATCACG GTTCGTATCA CCCCGGTTTA ATTCACGCTG CGTCGCAGGC CGATAGAGGT GAAATGTACA AAGATTATAT GCAATCGGTA ATTGATAACC CCTACTTCGT AGGCGCGCAC TGGTTCCAGT ATATGGATTC GCCATTAACG GGCAGAGCTT ATGATGGTGA AAACTACAAT GTGGGTTTTG TGGATGTTAC CGACACGCCG TACCAAGAAA TGGTGGATGC AGCAAAAGAA GTAAATGCGA AAATATACAC CGAAAGGCTA GGCAGCAAAT AA
|
Protein sequence | MGAIGGLVKI NISFIPLFVI SASIFIGACN SSKLESGVDS NNISPVMLFD FENDQVPSNI HFLNARASIE TYTGINGEPS KGLKLAMQSK QHSYTGLAIV PEQPWDWSEF TSASLYFDIV SVGDHSTQFY LDVTDQNGAV FTRSIDIPVG KMQSYYAKLS GHDLEVPDSG DVNDLNLASG LRSNPPTWTS DDRQFVWMWG VKNLDLSGIA KISLSVQSAM HDKTVIIDNI RIQPNPPQDE NFLVGLVDEF GQNAKVDYKG KIHSLEELHA ARDVELAELD GKPMPSRSKF GGWLAGPKLK ATGYFRTEKI NGKWMLVDPE GYPYFATGLD IIRLSNSSTM TGYDYDQATV AQRSADDVTP EDSKGLMAVS EKSFATRHLA SPTRAAMFNW LPDYDHPLAN HYNYRRSAHS GPLKRGEAYS FYSANLERKY GETYPGSYLD KWREVTVDRM LNWGFTSLGN WTDPAYYDNN RIPFFANGWV IGDFKTVSSG ADFWGAMPDV FDPEFKVRAM ETARVVSEEI KNSPWCVGVF IDNEKSFGRP DSDKAQYGIP IHTLGRPSEG VPTRQAFSKL LKAKYKTIAA LNNAWGLKLS SWAEFDLGVD VKALPVTDTL RADYSMLLSA YADQYFKVVH GAVEHYMPNH LYLGARFPDW GMPMEVVKAA AKYADVVSYN SYKEGLPKQK WAFLAELDKP SIIGEFHIGA MDHGSYHPGL IHAASQADRG EMYKDYMQSV IDNPYFVGAH WFQYMDSPLT GRAYDGENYN VGFVDVTDTP YQEMVDAAKE VNAKIYTERL GSK
|
| |