Gene Sde_2639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2639 
Symbol 
ID3968536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3338281 
End bp3339171 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content50% 
IMG OID637921737 
Productfructokinase 
Protein accessionYP_528111 
Protein GI90022284 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.293281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACT TATTTGGTGC TATTGAAGCT GGCGGAACAA AATTTGTGTG TGCAGTAGGC 
TCCGGACCAG ACGATCTAAC TGAAGTGCGC TTTCCCACCA CAACACCCCA AGAAACGCTA
GGCAAGGCAC TCGCTTTTTT TGCGCCATAC AAAGGCCAGT TAAAATCCAT TGGTATAGGT
AGCTTTGGCC CAGTTGACTT ACAACGCAAT TCGCCAACCT ATGGCTTTGT AACCAGCACA
CCTAAACCGG GCTGGGCAGA TACTGAATTT GCGGGTGTAT TTGCTCGCTT GTTTGATTTG
CCGGTAGGTT TTGATACCGA CGTAAACGGT GCAGCCTTGG GTGAGCAGCG GTGGGGCGCA
GCGCAGGGGT TAGATAATTT TATTTACATT ACTATGGGCA CAGGCATTGG TGGTGGTGTA
GTAGCCGGTG GTAAATTAAT TCACGGTTTA GTGCACCCAG AACTCGGCCA TATGTTTGTA
CCCAAGCAGC CAGACGATAC CTTTGCCGGG CAATGCCCAT ACCACGGTGA TAAATGCTTC
GAAGGGGTAG CTGCAGGGCC AGCTATTGGC GCGCGCTGGG GCACACCTGC ACACGAGTTA
CCCGCAGATC ACCCAGCGTG GGATCTTCAA GCGCGCTATG TTGCTACAGC ACTGGCGAGC
CTTGTTTGCA GCTTTTCGCC GCAGCGTATA ATTTTGGGCG GCGGCGTAAT GGGGCAAGCC
CATATGTTAA ATAGTGTGCG CGAAAAAACA GTACAAGTGC TTAACGGCTA TATTCAAAGC
CCTGCAATTT TAGAAAATAT AAATGAATAT TTAGTGTTGC CTGGCCTAGG TGATAAAGCG
GGCATTCTAG GTGCAATGGT GTTAGCGGAG CAGGCTTTCG ATAATCGCTA G
 
Protein sequence
MKNLFGAIEA GGTKFVCAVG SGPDDLTEVR FPTTTPQETL GKALAFFAPY KGQLKSIGIG 
SFGPVDLQRN SPTYGFVTST PKPGWADTEF AGVFARLFDL PVGFDTDVNG AALGEQRWGA
AQGLDNFIYI TMGTGIGGGV VAGGKLIHGL VHPELGHMFV PKQPDDTFAG QCPYHGDKCF
EGVAAGPAIG ARWGTPAHEL PADHPAWDLQ ARYVATALAS LVCSFSPQRI ILGGGVMGQA
HMLNSVREKT VQVLNGYIQS PAILENINEY LVLPGLGDKA GILGAMVLAE QAFDNR