| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2631 |
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| Symbol | |
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| ID | 3968528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3327031 |
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| End bp | 3329379 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921729 |
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| Product | hypothetical protein |
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| Protein accession | YP_528103 |
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| Protein GI | 90022276 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.979732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATTT CCAGCAGAAT GACTCTTCAC ACGCTCGCAG CAGTGGTATT CACTGTTGCG
TTGCTTAGTG CCTACTTCGC GCGGGAGATG AAGCAGGCAC TGGTCGACGG TGAAGTGCGC
AACCAGCAAG CACAGCTCGA TTTACGTGTA CAACACTTTA ATAGCGGCAT AGAGCAGTTG
CGGTCTGATG CGCTGCTTAT TAGTGAATCC CCATTTATTG TCGAATGGTT TAAGCAAAGC
ATTAATGTTA TCGATGATGC TAACGACCAA ATTAGTACCA ATACCTCTCT GCCCTCAAAT
GCCTACAGTT CACTTATAGA GCAATCATTT AATAATCTGC TCACTCGCCG GCCCGATTAC
TTTCAGGCCC GCATTCTTTC CATTTCTGGT GACGAGTTGA TTCGTGTAGA GCGCCAGAAC
GGTGCTGTTA AGGTGGTAGC GGCCAAGCAA TTACAAGATA AATCGGAAAC AGAGTATTTT
GAGGCGGCCA AAACTCTTAG CGCTGGCGAA GTGTATTTAA GCGACATAAA CCTTAATGAG
GAGTACGGCG CCATTGCGCA ACCAGAAGTA ACCACGTTGC GCGCTGCTGC GCCTATATTT
GATGGTAATG GCAAGCTGTT GGGTGTGTTT GTAATCAATA AAAATGTGGG CAGCTTCGTT
CGTGCAACGG TAACTAATAG CAGTGTAGGT GATGTATTCG TATTAAATGC ACGCGGCCAT
TTTATTTATC ACCCTCAAAA TGAGTACACC TTTTCTGAGC AGCGCGGCAC CGATTACACA
TTTGCCAAGC AGTGGCCTGA AATAGCAAAG TCGTTGTTAG TAGCATTTGA AAAGGATGCA
TTTAACTTAG CGACGAGTAG CTTAAATCTA GATAACTATG TAGTAAATGC TAGAAAAGTA
AGCTACCACA AAGGCACCAC ACCTAAGTAT ATTTCCATTA TTCAAATGGC GCCTTCTAGC
CATTTTTCTG CGCAAACCAT ACAGGCGCTG CAGCGTCAGA TATTCGCTGT GGCCCTATTG
TTAGCTGTGT GTATTGCATT AGCGTGGTTT TTTAATCGCA TAATGGTTAA ACGCGTTTAT
ATGTTAGGCG AGCTTTCTAA TTGTGTTGCT GCAGGGGGGC GAGACTTAAA ACTACCTGAA
GATCGCGGCG ATGAGGTCGA CCACGTAGCA AAAGCGTTTC AATCCATGGT GGATCAAATC
GATGGTAGAG AAAAGCTTCT ACACTTAGAA AAAGTAAAAA TACAAGCAAT CTTCGATGCA
GTAAACAGTG GGCTAATAAC CACAAATGAA GACGGCTATA TCGAAGAAGT AAACCAGTTT
GGAGCCCACT TGCTAACAAG CGAGCCTCAA GCAATGGAGG GGAAATTTAT AGGTGACTAC
CTAAAAAGCG AAAGCAGTCT TAATTCTAAT GTGTTTCAGG CTTATTTCGC GTTGCAGCAG
GAGGCAACGC AGCCATTTCA TTTTGAGGTA ATCGGTCTTC GTCATACTGG CCCGTTTCCT
GTACAGCTAA GTGTTGCTAG GTTCACTCTC GATGGCAAAA CTTTTTATGT GGCCGCAATA
GAAGATATTA GTGAGCGAAA AAGCATACAG TTAAGTCTAG ATAAGTACGC TAAAAAGTTG
GAAGCGAGCA ACAAAGAATT ACAAAGTTTT GCCTATGTGG CCTCGCACGA TTTGCAAGAG
CCGGTTAGAA AAATACAGTC GTTTGGCGAG CTGTTAGAGC GCGAAGAAAA AGCAAACCTT
TCCGAAAATG GTCAACTGTA TCTTAGCCGT ATGGTGTCTG CAGCGGAAAG AATGCGCAGC
TTAATCAGCT CGTTATTGGA GCTTTCTCGC GTCGGTAAAG AGCAAAATCA ATGCGAATGG
GTAGATGTAG AGTTGCAGTG TCGCGAGATA ACCGACGACC TAGAAAAGCT AATTACGGAG
AAAAACGCCG AGGTTAGCAT CGGCCCCTTA CCGCATGTAT GGGGCGAGCC AGTGCAAATG
CGCAGACTTA TGCAAAACTT AATAGGTAAT GCGCTTAAGT ATGTAAAAGT AAATGTTCGC
CCCGTGGTGG AGGTGGGGAT GTATTGCCCA ATGGATGTGG GTAATGAGTT CGCTTTAGAG
TTGGAGCGGT ACCCAGTGGC TTTTTTTGTG CAAGACAACG GAATAGGAAT AGCGCCTGAA
TTTCGCGAAA AAATATTTGT GGCGTTTGAA CGGCTACATG GGCGTAGTCA ATACCAAGGC
AACGGAATTG GGCTGGCAAT TTGCAAGAAA ATTGTAGAGG GCATGGGTGG AATTATATTT
GTCGATGACA ACCCAGCGGG TGGTTCCCGC TTTGTAGTAG CTTTGCCCAA GGCCGGGCCT
GAAAGCTAG
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| Protein sequence | MRISSRMTLH TLAAVVFTVA LLSAYFAREM KQALVDGEVR NQQAQLDLRV QHFNSGIEQL
RSDALLISES PFIVEWFKQS INVIDDANDQ ISTNTSLPSN AYSSLIEQSF NNLLTRRPDY
FQARILSISG DELIRVERQN GAVKVVAAKQ LQDKSETEYF EAAKTLSAGE VYLSDINLNE
EYGAIAQPEV TTLRAAAPIF DGNGKLLGVF VINKNVGSFV RATVTNSSVG DVFVLNARGH
FIYHPQNEYT FSEQRGTDYT FAKQWPEIAK SLLVAFEKDA FNLATSSLNL DNYVVNARKV
SYHKGTTPKY ISIIQMAPSS HFSAQTIQAL QRQIFAVALL LAVCIALAWF FNRIMVKRVY
MLGELSNCVA AGGRDLKLPE DRGDEVDHVA KAFQSMVDQI DGREKLLHLE KVKIQAIFDA
VNSGLITTNE DGYIEEVNQF GAHLLTSEPQ AMEGKFIGDY LKSESSLNSN VFQAYFALQQ
EATQPFHFEV IGLRHTGPFP VQLSVARFTL DGKTFYVAAI EDISERKSIQ LSLDKYAKKL
EASNKELQSF AYVASHDLQE PVRKIQSFGE LLEREEKANL SENGQLYLSR MVSAAERMRS
LISSLLELSR VGKEQNQCEW VDVELQCREI TDDLEKLITE KNAEVSIGPL PHVWGEPVQM
RRLMQNLIGN ALKYVKVNVR PVVEVGMYCP MDVGNEFALE LERYPVAFFV QDNGIGIAPE
FREKIFVAFE RLHGRSQYQG NGIGLAICKK IVEGMGGIIF VDDNPAGGSR FVVALPKAGP
ES
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