| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2626 |
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| Symbol | |
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| ID | 3968523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3322914 |
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| End bp | 3323486 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921724 |
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| Product | tRNA-(ms(2)io(6)A)-hydroxylase |
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| Protein accession | YP_528098 |
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| Protein GI | 90022271 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4445] Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.492116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGAAC TACGATTCGC GACACCCGCA AGCTGGGTAG AGGCCGTGCT GGCTGATTTT
GATGCTTTTT TAATCGATCA CGCCGCTGCA GAGAAAAAGG CCTCGGGCAT GGCTGTTTCT
ATGCTATCGC ACTACCCAGA TAGACCTGAG CTAGTGTCTG CCATGATTGA TTTGGCAATT
GAAGAGCTCG CTCACTTTAG AGAAGTAATA AAAGTAATGG CCAAGCGCGG TATTCACCAG
GGGCCAGACT CTAAAGACGC CTATGTAAAC AATTTGCGCA AACTACACCG CAGAGGTACC
GACGTATATA TGCTCGACCG GCTGCTAATA GCAGGTATTA TTGAGGCGCG CGGCTGCGAA
CGCTTTGGTT TGGTTGCACA AGCGCTACCA GAGGGTGAAC TAAAAAGCTT TTACAAAGCT
ATTACCGAAT CGGAAGCTCG CCACAGTGAC TTGTTTACCG ACCTTGCGGC AAAATATTTT
AGTCAAGATG TAATTAAAGC ACGCCTTGAT GAATTGCTAG ATGCCGAAGC AGAAATTGTA
AAAGCGCTAC CTATTGTTGC GGCTTTACAC TAG
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| Protein sequence | MFELRFATPA SWVEAVLADF DAFLIDHAAA EKKASGMAVS MLSHYPDRPE LVSAMIDLAI
EELAHFREVI KVMAKRGIHQ GPDSKDAYVN NLRKLHRRGT DVYMLDRLLI AGIIEARGCE
RFGLVAQALP EGELKSFYKA ITESEARHSD LFTDLAAKYF SQDVIKARLD ELLDAEAEIV
KALPIVAALH
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