Gene Sde_2625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2625 
Symbol 
ID3968522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3321591 
End bp3322778 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content45% 
IMG OID637921723 
Producttrans-2-enoyl-CoA reductase 
Protein accessionYP_528097 
Protein GI90022270 
COG category[S] Function unknown 
COG ID[COG3007] Uncharacterized paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.227051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTA AGCCCAAAGT TCGTGGTTTT ATTTGTACCA ACGCCCACCC AGAAGGGTGT 
GCGGCTAATG TTCGTGAGCA AATTGACTTT GTTAAGTCTC AGGGTGAGAT AGCCGACGGC
CCTAAAAAGG TATTAGTTAT TGGTGCGTCT ACCGGCTACG GTTTGGCTTC GCGCATAACT
GCAGCATTTG GTTGTGGCGC CGCTACTTTA GGTGTTTTCT TCGAAAAGCC TGGCACCGAA
CGCAAAACCG GCTCTGCAGG TTTTTACAAC TCTGTTGGTT TCCATGCAGA GGCCGAAAAA
GCAGGCCTAT ACGCTAAAAG CATTAATGGC GATGCGTTTT CTGATGAAAT TAAAGCGAAA
GCCATTGATG TTATTAAGCG CGATTTGGGC AAAGTAGATT TAGTTGTTTA CAGCTTAGCG
TCACCGCGTC GCACAGATCC AAAAACCGGC GAGTTGTACT CTTCGGTATT AAAGCCAATT
GGTCAGTCTT ACACGGCTAA AAACTTAAAC ACCGATACCC TAAAAATTGC CGATATGACT
ATTGAAGCGG CGAATGAAGA AGAAATTGCC AACACCGTAA AAGTAATGGG CGGTGAAGAT
TGGGAATTGT GGGTAGAAGC CCTAAAAGAA GCTGATGTAT TGGCTGAAAA CGCTAAAACT
GTTGCCTACA CCTACATTGG CGATAAGTTG ACTTGGCCAA TTTATGGCAA AGCAACCATT
GGCCGAGCAA AAGAAGATTT AGATCGCGCG GCAACAGCCA TTAACCAAAA GTTAGCCGAT
TTAGGCGGCA GCGCCAACGT AGCTGTATTA AAAGCATTGG TAACCCAATC TAGCTCTGCT
ATTCCTATTA TGCCTTTGTA TATTTCTATT CTTTACAAGG TGATGAAAGA GGAAGGCACG
CACGAAGGTT GTATCGAACA GTTGTATCGT TTGTTCACCG AAGGCGTATA CACCGACACC
CCACGTTTAG ACGATGCTAA CCGCTTCCGT ATGGATGAAA AAGAGCTAGC GGCAGAGCTG
CAAGCTAAAG TGGAAGCCAT TTGGCCAAAC GTTACCGAAG AAAATCTGTT TGAAGAAACC
GACTACAAAG GTTACAACGC AGAGTTTTTG AAGCTATTTG GTTTTGGTGT AGATGGCATA
GACTACGAAA AAGACGTTGC GCCAGATGTT GCACTCGATC TAGAGTAA
 
Protein sequence
MIIKPKVRGF ICTNAHPEGC AANVREQIDF VKSQGEIADG PKKVLVIGAS TGYGLASRIT 
AAFGCGAATL GVFFEKPGTE RKTGSAGFYN SVGFHAEAEK AGLYAKSING DAFSDEIKAK
AIDVIKRDLG KVDLVVYSLA SPRRTDPKTG ELYSSVLKPI GQSYTAKNLN TDTLKIADMT
IEAANEEEIA NTVKVMGGED WELWVEALKE ADVLAENAKT VAYTYIGDKL TWPIYGKATI
GRAKEDLDRA ATAINQKLAD LGGSANVAVL KALVTQSSSA IPIMPLYISI LYKVMKEEGT
HEGCIEQLYR LFTEGVYTDT PRLDDANRFR MDEKELAAEL QAKVEAIWPN VTEENLFEET
DYKGYNAEFL KLFGFGVDGI DYEKDVAPDV ALDLE