Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2622 |
Symbol | |
ID | 3968519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3318321 |
End bp | 3319196 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637921720 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_528094 |
Protein GI | 90022267 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCGTG GCAGTATGGT TGCCCTAGTT ACCCCAATGC AGGCGGATGG TTCGCTAGAT TGGGAGGCTC TCCATAAGCT GGTTGACTGG CATTTGCAGG AAGGTACCGA TGCAATTGTT GCAGTGGGCA CCACCGGCGA AAGCGCAACT CTCGATGTTA AAGAGCATAT CGCCGTTATT CGGGCTGTTG TCGATCAAGT AAACGGCAGG GTGCCTGTTA TTGCTGGTAC TGGCGCCAAC TCTACCAGCG AAGCCATTGA GCTTACTCAA GCGGCCAAAG ATGGCGGTGT AGATGCTTGC CTGCTGGTTG CCCCTTATTA CAACAAGCCC ACCCAAGAGG GCTTGTTCCT TCACCATCAA AAAATTGCTG CAAGCGTGGC CATTCCTCAG CTTCTATATA ACGTACCTGG CCGCACAGCG GTAGATATGC TGCCCGAGAC CATTGTGCGT TTATCCCATG TCGATAATAT TGTTGGCGTG AAAGAAGCCA CGGGCGATAT AGCGCGGGTA GGGCAAATAC TTGAAAGCGC CAAAGCAGGC TTTTTGTTGA TATCTGGCGA TGATGATACC GCGGTGGACT TTATTGCCGC TGGTGGTGTG GGGGAAATCT CTGTAACCGC CAACGTGGCG CCTAAATTAG TTGCGCAAAT GTGCGAACTT GCAGCGCAAG GTAAGGTCGA AGAAGCGCGT GCTATTAATG CGCGCCTAGC CGATGTGCAT ACGGCCATGT TTTTAGAGTC TAACCCTATA CCGGTAAAAT GGGCTCTGGC AAAAATGGGC TTAATGCCTA ATGGTATTCG CTTGCCTCTT ACCCCGTTAG ACGCAAAGTA TCACTTGCAA GTAGAGCAAG CACTGCGCGC GGCTAACTTA CTGTAA
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Protein sequence | MLRGSMVALV TPMQADGSLD WEALHKLVDW HLQEGTDAIV AVGTTGESAT LDVKEHIAVI RAVVDQVNGR VPVIAGTGAN STSEAIELTQ AAKDGGVDAC LLVAPYYNKP TQEGLFLHHQ KIAASVAIPQ LLYNVPGRTA VDMLPETIVR LSHVDNIVGV KEATGDIARV GQILESAKAG FLLISGDDDT AVDFIAAGGV GEISVTANVA PKLVAQMCEL AAQGKVEEAR AINARLADVH TAMFLESNPI PVKWALAKMG LMPNGIRLPL TPLDAKYHLQ VEQALRAANL L
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