| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2614 |
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| Symbol | |
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| ID | 3968607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3311155 |
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| End bp | 3311784 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921712 |
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| Product | TonB-like periplasmic protein |
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| Protein accession | YP_528086 |
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| Protein GI | 90022259 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.496859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAACAG TACTTACTAC CCCAATAAAC GACGGTTCTT CAATACGCAT TCTTTTAGTT
GCACCCCTCG CAGCGTTTAC AACTGCTGTG TTGGTAATGT TTATGTACAA ATTAGTGGTA
ACAAACTTTG TTGCCCCAAA AGACAAGCCT GAGCTAATAA TTCCCGAAGT AACCTGGGAG
GAGCCGGTAG TTGAAACGAT ACTTGATAAA TCTAAACCCG AATTAAATGA AGCTGTTGAA
ATGCCCCCAG TTATCTTGCC TAACGAAGGC CCAGTGGATG ATGGATTGGA CGTGACTATT
CCCACCACGG GGGCAGGAAC ATTTGAATTA ACATTTAACC CCAACTCAAC TAATAACAGC
TACCCAATAG CGCGCGTAAT GGTTGGGGCG CAATACCCAT CAACGGCCGC GGCAAGGGGT
ATAGAAGGTT ATGTCGATGT GCAGTTTGAT GTTGCCGCTT CCGGGGCCAC TGAAAATATT
CAAGTAGTGG GTTACGAGCC TTCAACAATA TTTAACCGCG CCGCTACCCG TGCCGCCGCG
AAATGGAAGT TTCAACCCAA AATGATAGAT GGAAAACCCG TAAGGTTTGA AGGCATGGTT
AAGCGCGTGC GCTTTGAAAT GCAAAAGTAA
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| Protein sequence | MTTVLTTPIN DGSSIRILLV APLAAFTTAV LVMFMYKLVV TNFVAPKDKP ELIIPEVTWE
EPVVETILDK SKPELNEAVE MPPVILPNEG PVDDGLDVTI PTTGAGTFEL TFNPNSTNNS
YPIARVMVGA QYPSTAAARG IEGYVDVQFD VAASGATENI QVVGYEPSTI FNRAATRAAA
KWKFQPKMID GKPVRFEGMV KRVRFEMQK
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