| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2607 |
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| Symbol | |
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| ID | 3968600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3305833 |
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| End bp | 3306981 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637921705 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_528079 |
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| Protein GI | 90022252 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAACG AATCCGCACA CAACACCCCA ACCGTAAAAT TAGCCTGCGA CCTCATTGCA
CAGCCTTCTG TTACCCCAGA AGATGCTCAC TGCCAACGCA TGATGATTGA GCGCTTAGAA
GCCATTGGTT TTAAAGTAGA AAACCTGCGG TTTGGTGACG TAGATAACTT TTGGGCGATT
CGCGGCGAAA GTGGGCCGAT ACTCGCCTTT GCTGGCCACA CAGATGTAGT GCCTACAGGC
GACTTGGGCA AATGGGCCAC AGACCCATTC ACCCCAACCA TTAAAGACGG CATGCTCTAC
GGGCGCGGCG CCGCCGACAT GAAAGGCAGC CTGGCCGCCA TGATTACCGC ATGCGAAAGT
TTTATTGCGG CCCACCCGAA CCACACAGGG CGCATTGCGT TTTTAATTAC CAGTGATGAA
GAAGGCCCAG CCATTAACGG CACCGTTAAA GTGGTTGAGT GGCTAGAAGC GCGCAACGAA
AAAATAAAAT GGTGTTTGGT TGGCGAGCCA TCAAGCACTA CCTTAGTGGG CGACGTAATC
AAAAATGGTC GCCGCGGTTC ACTAGGTGCC GAACTTATCG TTAAAGGCGT GCAGGGCCAT
GTGGCGTACC CTCACCTTGC GGTAAACCCC ATTCACATGA TTGCACCGGC ACTTGCAGAA
ATGGCGAGTG AAACCTGGGA TAACGGCAAC GAATTTTTTC CGCCTACCAG CTTTCAGGTT
TCTAATTTTA ACAGCGGTAC CGGCGCAACC AATGTGGTAC CGGGCGAAGC CAATGTGGTG
TTTAATTTCC GCTTCTCTAC CGAGCTAACC GCAGACATTT TAAAACAGCG CACCCACGCC
ATATTAGATA AGCACAACGT AAACTACGAT TTAAAATGGA ATTTATCTGG CGAGCCGTTT
TTAACGGCCG AAGGCGAGCT TGTTGCTGCA TCCGTTGCCG CCATTAAAAA AATTACCGGC
CGCGACACAG AGCTGTCTAC CGCTGGCGGC ACATCCGACG GGCGCTTTAT TGCCCCTACC
GGCGCACAGG TATTAGAGCT AGGCCCAGTT AACGCCACTA TTCATCAAAT AAACGAATGT
GTAAGCGTAG ATGACCTAAA TACCTTAAGC GACATCTACT GCACTATGCT TACAGAGTTA
CTCGCTTAA
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| Protein sequence | MTNESAHNTP TVKLACDLIA QPSVTPEDAH CQRMMIERLE AIGFKVENLR FGDVDNFWAI
RGESGPILAF AGHTDVVPTG DLGKWATDPF TPTIKDGMLY GRGAADMKGS LAAMITACES
FIAAHPNHTG RIAFLITSDE EGPAINGTVK VVEWLEARNE KIKWCLVGEP SSTTLVGDVI
KNGRRGSLGA ELIVKGVQGH VAYPHLAVNP IHMIAPALAE MASETWDNGN EFFPPTSFQV
SNFNSGTGAT NVVPGEANVV FNFRFSTELT ADILKQRTHA ILDKHNVNYD LKWNLSGEPF
LTAEGELVAA SVAAIKKITG RDTELSTAGG TSDGRFIAPT GAQVLELGPV NATIHQINEC
VSVDDLNTLS DIYCTMLTEL LA
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