| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2597 |
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| Symbol | rpsB |
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| ID | 3968647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3291978 |
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| End bp | 3292718 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921695 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_528069 |
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| Protein GI | 90022242 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.117298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTACTG TAAGCATGCG CGATATGCTG CAAGCCGGTG TCCACTTTGG TCACCAAACT
CGTTACTGGA ACCCTAAGAT GGGTAAATAC ATCTTCGGCG CTCGTAACAA AATTCATATC
ATTAACTTGG AGCACACTGT TCCTGCGTTT AATGAAGCGT TGGCCATTGT TAAGCAATTG
GGCAGCCAAA AGAAAAAAGT TTTGTTTGTT GGCACTAAGC GCGCTGCGCA AAAGTCTATT
AAAGAGCAAG CAGAACGTTC AAACATGCCT TTCGTTAGCC ATCGCTGGTT AGGTGGTATG
TTGACCAACT ACAAAACTAT CCGCGCTTCT ATTCGCCGTT ACCGCGAACT TGAAACTCAA
AGCCAAGACG GTACTTTCGA AAAGCTAACT AAAAAAGAAG CTTTAGTTCG TACTCGTATC
ATGGAGAAGC TAGAGAAGTC TATCGGTGGT ATTAAAGACA TGGGCGGTCT ACCAGACGCT
TTGTTTATCA TCGATGTTGA GCACGAGCGT ATTGCTATTC AAGAAGCTAA TAAATTGGGT
ATCCCAGTTA TTGGTGTTGT TGATACTAAC AGTGATCCCG CTGGTGTTGA CTACGTAATC
CCAGGTAACG ACGATGCTAT CCGTGCTATC AAGCTATACG CTACTGCAGT TGCAGACGCG
TGTATTGAAG GCGCTGCGGA CTCTGCATCT GTTCCTAATA AAGACGAATT CGTAGAAGAA
AAAGCTGCTG ACGCCGAGTA A
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| Protein sequence | MPTVSMRDML QAGVHFGHQT RYWNPKMGKY IFGARNKIHI INLEHTVPAF NEALAIVKQL
GSQKKKVLFV GTKRAAQKSI KEQAERSNMP FVSHRWLGGM LTNYKTIRAS IRRYRELETQ
SQDGTFEKLT KKEALVRTRI MEKLEKSIGG IKDMGGLPDA LFIIDVEHER IAIQEANKLG
IPVIGVVDTN SDPAGVDYVI PGNDDAIRAI KLYATAVADA CIEGAADSAS VPNKDEFVEE
KAADAE
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