| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2591 |
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| Symbol | |
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| ID | 3968641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3286744 |
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| End bp | 3287922 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921689 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_528063 |
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| Protein GI | 90022236 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.150904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGA TTTGTGTTCT CGGCTCAACC GGCTCTATAG GTATAAGCAC ACTTGATGTG
CTCGCTTCCC ATCCAGACAA ATTTTCTGTG TATGCGCTTA CAGCGAATTC CAGTATCGAC
TTGCTGGTAG AGCAGTGCCT AAAGTTTTCG CCGCAATATG CTGTTATTCG GGATGAAGCG
CTGTATTTAC CGTTGAAGCA GCGTATCGAG TCGCTAAATT GTACAACGGA AGTGCTTGCT
GGTGAGCAGG CGCTGTGCGA TGTAGCCTCC GCAGTCCAAG TAGATTCCGT GATGGCCGCC
ATAGTAGGCG CCGCGGGTTT GGCGCCAACC TTGGCTGCTG TAGAGGCGGG TAAGCGTGTG
CTGCTGGCCA ATAAAGAAAG TTTAGTGATG AGCGGCAAGC TGTTTATGCA AGCAGCTAAG
GCCGCTTCCG CATTGGTTTT ACCAATAGAT AGCGAGCACA ACGCGATTTT TCAGTGCTTA
CCGCAGCCGT ATACGTCGTT AGCGGATGCG GGCGTGCAAA AAATATTACT CACCGGCTCC
GGCGGTCCGT TTCGCGACAC GCCACTTGCC GATTTAAGTG CTAAAACGCC AGACCAAGCA
TGCGCACACC CTAATTGGTC TATGGGGCGA AAGATATCTG TCGACTCTGC CACCATGATG
AATAAAGGGT TGGAGTTTAT AGAAGCCTGC TGGTTATTCG ACGCAACCCC AGAGCAAATA
GAGATAGTTG TTCACCCGCA AAGTATTATC CATTCGATGG TGCAATATGT AGATGGGTCG
GTGCTTGCGC AGATGGGGAA CCCCGATATG CGCACGCCCA TTGCGCATTG TTTAGATTGG
CCTCGCAGAA TAGATTCTGG GGTGGCGTCG TTAGATTTCT TTGCGTTACA GGGGTTAGAT
TTTTGCCGCC CCGATTACCA GCGCTTTCCC GCGCTTGCCT TGGCCACTAG CGCCATTAAA
AGTGGTGGAA CGTACCCTGT AGCATTGAAT GCTGCCAATG AAGTGGCGGT AGCCTTGTTT
TTAGAAGAAA AAATCAAATT TACAGATATT GCGGCAATTA TTGCTGCAGT ATTAGAAGAT
TGGGAAACTT GTGAACCTGA TACAATCGCT GCGGTCAAAG AAGCCGACGC AATAGCGCGC
AAGCTGGCTT ATAGTGTAGC CGCGAAATTT GGTTATTAA
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| Protein sequence | MQQICVLGST GSIGISTLDV LASHPDKFSV YALTANSSID LLVEQCLKFS PQYAVIRDEA
LYLPLKQRIE SLNCTTEVLA GEQALCDVAS AVQVDSVMAA IVGAAGLAPT LAAVEAGKRV
LLANKESLVM SGKLFMQAAK AASALVLPID SEHNAIFQCL PQPYTSLADA GVQKILLTGS
GGPFRDTPLA DLSAKTPDQA CAHPNWSMGR KISVDSATMM NKGLEFIEAC WLFDATPEQI
EIVVHPQSII HSMVQYVDGS VLAQMGNPDM RTPIAHCLDW PRRIDSGVAS LDFFALQGLD
FCRPDYQRFP ALALATSAIK SGGTYPVALN AANEVAVALF LEEKIKFTDI AAIIAAVLED
WETCEPDTIA AVKEADAIAR KLAYSVAAKF GY
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