| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2584 |
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| Symbol | |
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| ID | 3968634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3278486 |
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| End bp | 3279652 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921682 |
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| Product | Lipid-A-disaccharide synthase |
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| Protein accession | YP_528056 |
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| Protein GI | 90022229 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.372762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCAC TAAAACGAGT TGCCATTGTT GTCGGTGAGG CTTCCGGCGA TATTTTGGGG
GCAGGCTTAA TGGCTGCTCT AAAAAAACGC TACCCCGATT GTGAATTCGA AGGTATTGGC
GGCCCCAAAA TGCTCGCCCT CGGTTTTAAT TCCCTGTACC AAATGGATCG TCTCGCTGTA
ATGGGCTTTG TTGAGCCATT AAAACGGCTG CCCGAGTTAC TTGGTATTCG TAAGTCTTTA
CGCCAGCGCT ATTTAACCAA CCCGCCTGAT GTGTTTATTG GCATTGATGC GCCAGATTTT
AATTTAAATT TAGAAGTGAA TTTGCGCGAA GCTGGTGTGC CAGTTGTACA TTATGTTTCG
CCTTCGGTGT GGGCATGGCG CAGGGGGAGG TTAAAAAAGA TCGCGAAAGC CGTGGATTTG
ATGCTAACGC TCTTTCCATT CGAGTCGTCC TTTTTTAATG AGCAAAACAT TCCCAACCTG
TTTGTTGGTC ACCCGCTCGC CGATACTATT CCACTCGAAA ATGAAAAAAC AGGCGCAAGA
GAGCGATTGG GCTTAAGTGC CGAAAATAAC GAACGCTGGG TGGCGCTATT GCCAGGTAGT
CGCGGTGGTG AAGTTGAGCA CTTGTGTGAG CGTTTCCTGT TGGCCGCTCA GCAATCTTTT
GCTGGTCGGC CTAATTTACG TATTATTATT CCTGCCGCTA ACGATGCACG CCATTCTCAA
ATCTCAGAAG TGCTAAAGCG CTACTCAGAA TTGCCGGTTA CTTTACTGCA CGGGCAAAGT
CACGATGCTA TGCTCGCGGC AGATGCTATT TTAATTGCAT CTGGCACTGC CACTTTAGAG
GCTATGTTGC TTAAGCGCCC TATGGTAATT GCTTACCATA TGGCAGCTTT CTCATATTGG
CTGCTGAGTA AATTAGTGAA AAGTAAGTTT GTAGGGTTGC CAAACTTACT GGCTGATAAA
GAGTTGGTAC CAGAGTTACT GCAGCATAAT GCTACGCCGA GCCAGTTAAG TGCGGCCCTA
AACGTATATT TAGACAGCGA AAAAACAACG CAGCAACTCA TCGAGCAGTT TAATGCTATT
CACCTGCAAT TGCGCCGAGA TGCAAGCGAA ACCGCAGCGC AAGGTATTGT AGACATGCTT
GCGGCTAAGC GCGATATAGC GCGTTAA
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| Protein sequence | MSSLKRVAIV VGEASGDILG AGLMAALKKR YPDCEFEGIG GPKMLALGFN SLYQMDRLAV
MGFVEPLKRL PELLGIRKSL RQRYLTNPPD VFIGIDAPDF NLNLEVNLRE AGVPVVHYVS
PSVWAWRRGR LKKIAKAVDL MLTLFPFESS FFNEQNIPNL FVGHPLADTI PLENEKTGAR
ERLGLSAENN ERWVALLPGS RGGEVEHLCE RFLLAAQQSF AGRPNLRIII PAANDARHSQ
ISEVLKRYSE LPVTLLHGQS HDAMLAADAI LIASGTATLE AMLLKRPMVI AYHMAAFSYW
LLSKLVKSKF VGLPNLLADK ELVPELLQHN ATPSQLSAAL NVYLDSEKTT QQLIEQFNAI
HLQLRRDASE TAAQGIVDML AAKRDIAR
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