| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2572 |
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| Symbol | |
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| ID | 3968681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3263232 |
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| End bp | 3265145 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921670 |
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| Product | hypothetical protein |
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| Protein accession | YP_528044 |
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| Protein GI | 90022217 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1038] Pyruvate carboxylase |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.431433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAGC AAATTATCAA CGTCCCAGAT ATTGGTGGGG CGGACAACGT AGATATTATT
GAGATATGTG TTGCTGTAGG CGATACCGTT TCTGCTGAAG ACTCTTTGCT TGTTTTAGAA
TCAGATAAGG CCTCTATGGA AGTGCCTTCG CCTGTTTCTG GTAAAGTGGT TGGCATTCTT
GTTAAAGAGG GCGGTAAAGT TTCTGAAGGC GATGCCATAT TTGAAATTGA AGCAGAGGGC
GCAGCTGATG CGCCTGCTGC TGAACCGGCA GCCGCTCCTG CGGCGGCGCC AGCCCCAGAG
GCGGCTGCAC CTGCAGCATC TTCTGAGCAG TTGGTGAAGG TTCCAGATAT TGGTGGTTCC
GAAAACGTTG AAGTGATCGA GTTATGTGTT GCTGTGGGCG ATGAGGTTGC CGAAGGCGAT
TCCATTATCG TGCTAGAAAG CGACAAGGCT TCAATGGAAG TGCCTGCGCC AGCAAGCGGT
AAAGTGGTTA GCTTTGCTAT CAAAGAAGGC GATAAGCTTT CTGAAGGCGA CGATATTCTT
GTGTTAGAAG TAAGTGGTGG CGCAGCTGCA CCAGCTGCCG CTCCTGCTGA GTCTGCTCCT
GTAGCCGCGG CCCCTGCACC TGCACCTGCT GCAAGTGGCG GTGTGACCGA TGTAAATGTT
CCTGACATTG GCGGCTCAGA AAACGTTGAA GTTATCGAAG TTTGCGTTGC AGAAGGCGAT
GAAATTAGCG AAGGCGACTC CATTGTTGTG TTGGAAAGCG ATAAAGCATC CATGGAGATC
CCATCACCTG CTAGCGGTAA AGTTGTAAGC ATTACCGTTA AAGAAGGCGA TAAAGTATCT
GAAGGTGCGG CACTGCTTAA ATTAGAAATT GTTGGTGCTG CCCCTGCTGC AGCTCCTGCG
CCTGCTGCGG CACCCGCAGC GCCACAAGCG CCTGCTAAGC CTGTTGAGCA GCCAGTGAAG
ACCACGCAAG AGTTACACCC TGCGGAAGTG TCTGCCACTA CTGGTGAAGT GTATGCCGGC
CCTGCAGTAC GCAAGTTAGC GCGTCAGTTA GGTGTAAACC TTTCAGAAGT GAAGCCAACC
GGCCCTCGTA AGCGTCATAC TAAAGACGAT GTACGCGAGT TTGTTAAAAC TGTAATGAAG
CAACGCAGCA CTGGCGGCGC AGCAGTTACA GGTGGTTCGG GTATTCCTGC AGTACCAGCA
GTAGATTTTT CTCAGTTCGG CGAGATCGAA ATGCAGAAAA TGAGCAAAAT CAAAAAGGTT
ACCGCTGCTG CAATGGTTCG CAACTGGTTG AACGTGCCAC ACGTTACTCA GTTCGACGAT
GCTGATATTA CCGAGCTTGA AGCATTCCGT AAGAACATGA AAGCAGAAGC CGAAGCGGCA
GGTGTGAAGT TAACACCATT ACCGTTCCTG CTAAAAGCTT GTGCGGCAGC GCTTAAAGCG
GAGCCTAGCT TTAATGTTTC TATGCACCCA GACGGCGAGC ATATTGTGCA GAAGAAATAC
ATCCACATTG GTATGGCTGT AGATACGCCA AACGGTTTGG TTGTACCTGT TATTCGCGAC
GTAGACAAAA AAGGTTTGTT CGAACTTGCG GCTGAAACAG TAGCTTTAGC TAAGAAAGCG
CGCGATGGTA AGTTGATGCC TAAAGATATG CAGGGCGGAT GTTTTACTAT TTCTAGCCTT
GGCCCAATTG GCGGTACTGG TTTTACCCCA ATTGTGAACG CGCCTGAAGT TGCTATTTTG
GGTGTTTCTA AAGCGGATAT TAAACCGCGT TGGAACGGTA AAGAGTTTGA GCCTCGTCAG
ATGTTGCCTT TGTGCTTATC TTACGATCAC CGTGCAATTA ACGGTGGTGA TGCAGGTCGC
TTCTTTACGT TCTTATCTGC AGTATTGTCT GATGTGCGTC GCTTACTCCT TTAA
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| Protein sequence | MAKQIINVPD IGGADNVDII EICVAVGDTV SAEDSLLVLE SDKASMEVPS PVSGKVVGIL
VKEGGKVSEG DAIFEIEAEG AADAPAAEPA AAPAAAPAPE AAAPAASSEQ LVKVPDIGGS
ENVEVIELCV AVGDEVAEGD SIIVLESDKA SMEVPAPASG KVVSFAIKEG DKLSEGDDIL
VLEVSGGAAA PAAAPAESAP VAAAPAPAPA ASGGVTDVNV PDIGGSENVE VIEVCVAEGD
EISEGDSIVV LESDKASMEI PSPASGKVVS ITVKEGDKVS EGAALLKLEI VGAAPAAAPA
PAAAPAAPQA PAKPVEQPVK TTQELHPAEV SATTGEVYAG PAVRKLARQL GVNLSEVKPT
GPRKRHTKDD VREFVKTVMK QRSTGGAAVT GGSGIPAVPA VDFSQFGEIE MQKMSKIKKV
TAAAMVRNWL NVPHVTQFDD ADITELEAFR KNMKAEAEAA GVKLTPLPFL LKACAAALKA
EPSFNVSMHP DGEHIVQKKY IHIGMAVDTP NGLVVPVIRD VDKKGLFELA AETVALAKKA
RDGKLMPKDM QGGCFTISSL GPIGGTGFTP IVNAPEVAIL GVSKADIKPR WNGKEFEPRQ
MLPLCLSYDH RAINGGDAGR FFTFLSAVLS DVRRLLL
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