Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2572 |
Symbol | |
ID | 3968681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3263232 |
End bp | 3265145 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637921670 |
Product | hypothetical protein |
Protein accession | YP_528044 |
Protein GI | 90022217 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [COG1038] Pyruvate carboxylase |
TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.431433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTAAGC AAATTATCAA CGTCCCAGAT ATTGGTGGGG CGGACAACGT AGATATTATT GAGATATGTG TTGCTGTAGG CGATACCGTT TCTGCTGAAG ACTCTTTGCT TGTTTTAGAA TCAGATAAGG CCTCTATGGA AGTGCCTTCG CCTGTTTCTG GTAAAGTGGT TGGCATTCTT GTTAAAGAGG GCGGTAAAGT TTCTGAAGGC GATGCCATAT TTGAAATTGA AGCAGAGGGC GCAGCTGATG CGCCTGCTGC TGAACCGGCA GCCGCTCCTG CGGCGGCGCC AGCCCCAGAG GCGGCTGCAC CTGCAGCATC TTCTGAGCAG TTGGTGAAGG TTCCAGATAT TGGTGGTTCC GAAAACGTTG AAGTGATCGA GTTATGTGTT GCTGTGGGCG ATGAGGTTGC CGAAGGCGAT TCCATTATCG TGCTAGAAAG CGACAAGGCT TCAATGGAAG TGCCTGCGCC AGCAAGCGGT AAAGTGGTTA GCTTTGCTAT CAAAGAAGGC GATAAGCTTT CTGAAGGCGA CGATATTCTT GTGTTAGAAG TAAGTGGTGG CGCAGCTGCA CCAGCTGCCG CTCCTGCTGA GTCTGCTCCT GTAGCCGCGG CCCCTGCACC TGCACCTGCT GCAAGTGGCG GTGTGACCGA TGTAAATGTT CCTGACATTG GCGGCTCAGA AAACGTTGAA GTTATCGAAG TTTGCGTTGC AGAAGGCGAT GAAATTAGCG AAGGCGACTC CATTGTTGTG TTGGAAAGCG ATAAAGCATC CATGGAGATC CCATCACCTG CTAGCGGTAA AGTTGTAAGC ATTACCGTTA AAGAAGGCGA TAAAGTATCT GAAGGTGCGG CACTGCTTAA ATTAGAAATT GTTGGTGCTG CCCCTGCTGC AGCTCCTGCG CCTGCTGCGG CACCCGCAGC GCCACAAGCG CCTGCTAAGC CTGTTGAGCA GCCAGTGAAG ACCACGCAAG AGTTACACCC TGCGGAAGTG TCTGCCACTA CTGGTGAAGT GTATGCCGGC CCTGCAGTAC GCAAGTTAGC GCGTCAGTTA GGTGTAAACC TTTCAGAAGT GAAGCCAACC GGCCCTCGTA AGCGTCATAC TAAAGACGAT GTACGCGAGT TTGTTAAAAC TGTAATGAAG CAACGCAGCA CTGGCGGCGC AGCAGTTACA GGTGGTTCGG GTATTCCTGC AGTACCAGCA GTAGATTTTT CTCAGTTCGG CGAGATCGAA ATGCAGAAAA TGAGCAAAAT CAAAAAGGTT ACCGCTGCTG CAATGGTTCG CAACTGGTTG AACGTGCCAC ACGTTACTCA GTTCGACGAT GCTGATATTA CCGAGCTTGA AGCATTCCGT AAGAACATGA AAGCAGAAGC CGAAGCGGCA GGTGTGAAGT TAACACCATT ACCGTTCCTG CTAAAAGCTT GTGCGGCAGC GCTTAAAGCG GAGCCTAGCT TTAATGTTTC TATGCACCCA GACGGCGAGC ATATTGTGCA GAAGAAATAC ATCCACATTG GTATGGCTGT AGATACGCCA AACGGTTTGG TTGTACCTGT TATTCGCGAC GTAGACAAAA AAGGTTTGTT CGAACTTGCG GCTGAAACAG TAGCTTTAGC TAAGAAAGCG CGCGATGGTA AGTTGATGCC TAAAGATATG CAGGGCGGAT GTTTTACTAT TTCTAGCCTT GGCCCAATTG GCGGTACTGG TTTTACCCCA ATTGTGAACG CGCCTGAAGT TGCTATTTTG GGTGTTTCTA AAGCGGATAT TAAACCGCGT TGGAACGGTA AAGAGTTTGA GCCTCGTCAG ATGTTGCCTT TGTGCTTATC TTACGATCAC CGTGCAATTA ACGGTGGTGA TGCAGGTCGC TTCTTTACGT TCTTATCTGC AGTATTGTCT GATGTGCGTC GCTTACTCCT TTAA
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Protein sequence | MAKQIINVPD IGGADNVDII EICVAVGDTV SAEDSLLVLE SDKASMEVPS PVSGKVVGIL VKEGGKVSEG DAIFEIEAEG AADAPAAEPA AAPAAAPAPE AAAPAASSEQ LVKVPDIGGS ENVEVIELCV AVGDEVAEGD SIIVLESDKA SMEVPAPASG KVVSFAIKEG DKLSEGDDIL VLEVSGGAAA PAAAPAESAP VAAAPAPAPA ASGGVTDVNV PDIGGSENVE VIEVCVAEGD EISEGDSIVV LESDKASMEI PSPASGKVVS ITVKEGDKVS EGAALLKLEI VGAAPAAAPA PAAAPAAPQA PAKPVEQPVK TTQELHPAEV SATTGEVYAG PAVRKLARQL GVNLSEVKPT GPRKRHTKDD VREFVKTVMK QRSTGGAAVT GGSGIPAVPA VDFSQFGEIE MQKMSKIKKV TAAAMVRNWL NVPHVTQFDD ADITELEAFR KNMKAEAEAA GVKLTPLPFL LKACAAALKA EPSFNVSMHP DGEHIVQKKY IHIGMAVDTP NGLVVPVIRD VDKKGLFELA AETVALAKKA RDGKLMPKDM QGGCFTISSL GPIGGTGFTP IVNAPEVAIL GVSKADIKPR WNGKEFEPRQ MLPLCLSYDH RAINGGDAGR FFTFLSAVLS DVRRLLL
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