Gene Sde_2569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2569 
Symbol 
ID3968678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3260357 
End bp3260872 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content51% 
IMG OID637921667 
Productmetal dependent phosphohydrolase 
Protein accessionYP_528041 
Protein GI90022214 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGTAG AAGCACAAAC ATTACCTGTT GGAGTGGAGC AGCTAGACCA CTACCGCGTG 
GCAGATTTAA TGAGCGGTAC TTTGCTTACC GCATATGAAG GTTGGTCTGT TAAGCGGTTG
GCCGCATTTT TCGTGCGCCA CGATATTTCT GCCGCTCCGG TTGTGGCGTC AGATGAAGAG
TTGGTTGGGG TTGTATCTCA GTCCGATGTG GTGCGTTTTG AGAGTAGAAG CCCAACGGAC
GATGAGATTC AGCGCTTAAT TCGTCAGTAT TGCGGCCCCT ACAGCGCGGA GCTCACTCCG
CAAGAGGTTA CCCACCTTAA AGAAAAGGCC AGCGAGACCT GCACCGTTAA CTCAATAATG
ACGCCACAGG TTATTTCGGT GGAGGCAACC GAGTTTGCAG GGAAGGCGTG CGCCACCATG
TTGGAAAAAA ATATCCACCG GCTATTTGTT ACTGAAAATG GCCGCTTAAT TGGTGTGCTC
ACCGCCATGG ATTGTTTGCG CAAGCTGGTC GAGTAG
 
Protein sequence
MGVEAQTLPV GVEQLDHYRV ADLMSGTLLT AYEGWSVKRL AAFFVRHDIS AAPVVASDEE 
LVGVVSQSDV VRFESRSPTD DEIQRLIRQY CGPYSAELTP QEVTHLKEKA SETCTVNSIM
TPQVISVEAT EFAGKACATM LEKNIHRLFV TENGRLIGVL TAMDCLRKLV E