| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2566 |
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| Symbol | |
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| ID | 3968675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3254713 |
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| End bp | 3257511 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921664 |
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| Product | isoleucyl-tRNA synthetase |
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| Protein accession | YP_528038 |
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| Protein GI | 90022211 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACT ACAAAGCGAC ACTCAATCTT CCGCAAACGT CTTTTGCCAT GAAAGCAAAC
CTCGCTCAGC GCGAGCCAGG CATGCTAAAA CAATGGCAGC AAAGCAAATT GTATGAGCAA
ATCCGCGAAG CGCGTAAAGG TCGCGAGCAA TTTATTTTGC ACGATGGGCC TCCCTATGCA
AACGGCGATA TTCATATCGG TCACGCCGTA AACAAAATTT TAAAAGACAT CATCATCAAA
GCCAAAACCT TGAGCGGCTT TGACGCCCCC TATGTGCCCG GCTGGGATTG TCACGGCTTG
CCTATTGAGC ACAACGTAGA AAAGAAAGTG GGCAAAGCAG GCGTTAAAAT TGATCACGTT
GCATTTCGTC AAAAATGCCG CGATTACGCT CGCAAGCAGG TTGAAGGTCA GAAAAAAGAT
TTTATTCGCT TGGGTGTGCT TGGCGAGTGG GATACACCAT ACCTCACTAT GGATTTTAAA
ACCGAAGCCG ATACCGTGCG CGCTTTGGGT AAAATTGTAG AAAACGGTCA CTTACACAAA
GGTTTTAAAC CTGTGTACTG GAGTGTAGTG GGTGCCTCTG CATTGGCTGA AGCCGAAGTG
GAATACCAAG ATAAAACATC CTTCGCGATA GACGTATGCT TTGGTGTTGC AGATGTAGAA
GACTTTGCCG CACGCGTTGG CAGCGTTGCT GGCACCGGTA ATATCTCTGT TGTTATTTGG
ACAACCACAC CGTGGACCTT ACCGGCTAAC CAAGCCGTTA GTGTAAATGG CGAGCTAGAT
TATGTAGTGG TTCAGCATGG CGAGCAGCGA TTGGTGCTGG CAGAAGCGCT GGTGGAATCT
GTTGCTAAAC GTTTAGGCGT AGAAGAGCTA GCTACTGTCG CTACCTTCAA GGGTGCGGCC
ATAGAAGGGT TGAAATTAAA TCATCCTTTC TACGCTAAGC AAGTGCCTGT TTTGTTGGGC
GATCACGTTA CCACCGATGC CGGTACTGGC TGTGTTCACA CTGCACCCGA TCACGGCGCA
GATGACTTTG TAGTATCCAA CAAATACGGC ATAGAAACGC TTAATTATGT AGACGAAAAT
GGTATCTATC GCGATAACGT TGAAATATTC GCGGGCGACC ACGTTTATAA AGTGGATGAA
AAGGTTATAG GTCTGTTAGA AGAAAATGGC CGTTTACTGC ATCAAGCTAA ATTGGTGCAT
AGCTTCCCAC ATTGCTGGCG AACTAAAACC CCGCTTATAT TCCGCGCGAC ACCGCAATGG
TTTGTAAGTA TGACCAAAAA CAACCTGTTA AAAGATGTAA AACAGGCAGT AGAGGGAGTT
AATTGGGTGC CCGATTGGGG CCGTGCACGT ATAGATAGCA TGTTAGATAG CAGCCCAGAT
TGGTGTATCT CTCGTCAGCG TACGTGGGGC GTGCCAATTA CTTTATTTGT GCACAAAGAA
ACGCAAGAGC TGCACCCCAA CACAGCTGCA TTGGTAGAAG ACGTTGCCAA GCGCATAGAA
GAAAAGGGGA TGGATGCTTG GTTTGAATTA GATGCAGTAG AGCTACTAGG TGACGAAGCC
GATCAGTACC AAAAGGTGAC AGATACCTTA GACGTGTGGT TCGACTCTGG TGTAACTCAC
TATTCGGTGG TTAACGCGCG TGAAAACTTA CGTTACCCCG CAGATTTGTA CCTAGAAGGC
TCGGATCAGC ATCGCGGCTG GTTCCAATCT TCTTTAAAAA CATCAATGGC TATAAACGGC
TCTGCACCCT ACAAACAAGT GCTTACCCAC GGTTTTACTG TGGATGCCGA TGGCAAAAAA
ATGTCGAAGT CGATTGGTAA TACCGTGTCG CCACAAAAGG TGATGAACGA CTTAGGCGCA
GATGTTTTAC GCTTGTGGGT CGCGGCTACC GATTTTAGCG GTGACATGAG TGTATCTGAC
GAAATTTTAA AGCGTACAGC AGATTCCTAT CGCCGTATTC GCAATACTGC GCGTTTCTTC
CTGTCTAACC TTACCGGTTT TAACCCACAA ACCGATTTAC TGCCAGCCGA AGAAATGTTG
TCGTTAGACC GCTGGGCAGT CGATCGCGCC GCCGCGTTGC AAGCCGATAT ATTAAAAAGC
TACGACACAT ATCAGCTGCA CCAAATCTAT CAAAAACTAC ACAACTTCTG TGTTGTAGAA
ATGGGTGGCT TTTACCTAGA TATTATTAAA GATCGCCAGT ACACCACCAA AGAAACCAGC
CATGCGCGCC GCTCTGCGCA AAGCGCTTTG TATCATATTG TGGAAGCGTT TGTGCGCTGG
ATAGCACCAA TTTGCTCGTT CACCGCTGAC GAAATTTGGC AAGCAATGCC AGGTGAAAAA
ACTGGCACAG TATTTACTGC TGAATGGTAC AACTTGCCAC GTTTGGCTGA AGGCGCTGAG
TTGGGTAATA GTTACTGGCA ATTTATTGCC AAAGTAAAAA CGGCAGTAAA CAAAACCATA
GAAGCCAAGC GCAGTGCCGG CGAAGTGGGT GGCTCGTTGG CTGCAGAGGT GACGCTGTAT
TGTTCAGAGA GTGTTGCACA AAAGCTTACT TTGCTAAAAG ACGAATTGCG CTTTGTGTTG
ATTTGTTCTT CGGTAACGGT GGTTGCGGCC AGCGAAACCG AAGGCGAGGC TACCGAGGTG
GAAGGATTGC GTGTTGCGGT TGCTAAGTCT AGCCACGAAA AATGTGCGCG CTGCTGGCAT
CACCGCGAAG ACGTGGGCCA AAACACTGCG CACCCAGAAA TTTGTGGGCG TTGCGTAGAA
AATATTGATG GAGAAGGGGA ATCGCGTGAA TTCGCCTAG
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| Protein sequence | MTDYKATLNL PQTSFAMKAN LAQREPGMLK QWQQSKLYEQ IREARKGREQ FILHDGPPYA
NGDIHIGHAV NKILKDIIIK AKTLSGFDAP YVPGWDCHGL PIEHNVEKKV GKAGVKIDHV
AFRQKCRDYA RKQVEGQKKD FIRLGVLGEW DTPYLTMDFK TEADTVRALG KIVENGHLHK
GFKPVYWSVV GASALAEAEV EYQDKTSFAI DVCFGVADVE DFAARVGSVA GTGNISVVIW
TTTPWTLPAN QAVSVNGELD YVVVQHGEQR LVLAEALVES VAKRLGVEEL ATVATFKGAA
IEGLKLNHPF YAKQVPVLLG DHVTTDAGTG CVHTAPDHGA DDFVVSNKYG IETLNYVDEN
GIYRDNVEIF AGDHVYKVDE KVIGLLEENG RLLHQAKLVH SFPHCWRTKT PLIFRATPQW
FVSMTKNNLL KDVKQAVEGV NWVPDWGRAR IDSMLDSSPD WCISRQRTWG VPITLFVHKE
TQELHPNTAA LVEDVAKRIE EKGMDAWFEL DAVELLGDEA DQYQKVTDTL DVWFDSGVTH
YSVVNARENL RYPADLYLEG SDQHRGWFQS SLKTSMAING SAPYKQVLTH GFTVDADGKK
MSKSIGNTVS PQKVMNDLGA DVLRLWVAAT DFSGDMSVSD EILKRTADSY RRIRNTARFF
LSNLTGFNPQ TDLLPAEEML SLDRWAVDRA AALQADILKS YDTYQLHQIY QKLHNFCVVE
MGGFYLDIIK DRQYTTKETS HARRSAQSAL YHIVEAFVRW IAPICSFTAD EIWQAMPGEK
TGTVFTAEWY NLPRLAEGAE LGNSYWQFIA KVKTAVNKTI EAKRSAGEVG GSLAAEVTLY
CSESVAQKLT LLKDELRFVL ICSSVTVVAA SETEGEATEV EGLRVAVAKS SHEKCARCWH
HREDVGQNTA HPEICGRCVE NIDGEGESRE FA
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