Gene Sde_2564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2564 
Symbol 
ID3968673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3253712 
End bp3254167 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content48% 
IMG OID637921662 
Productribosomal protein S2 
Protein accessionYP_528036 
Protein GI90022209 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.749504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAACG ATGTATTAGC AGTTGGCGCC GGTATGGAAG TGACTTTGCA CTTCGCGTTG 
ACCCTAGAAG ATGGTGCCGT AGTAGACAGT AATTTCGAAT CTAAGCCCGC CACCTTTGTA
GTTGGCGATG GCAAGCTGCT CCCAGGTTTT GAGCAAGCTA TTTTCGGGTT AATCGCCGGC
GATAAAAAAG CCATGCACAT TCCGCCCGAA CAGGGTTTCG GTCAGCCCAA CCCAAATAAT
ATTCAAGAAG TAAAGCGTAA AGTGTTTGCC GCCGATATGG AGCTAGCGCA AGGCTTGGTG
GTGTCGTTTG CAGATGCTAA CGGTGGTGAA ATGCCCGGAG TGATTGCTGA AATTGGCGAA
GAAATTGTTA AAGTTGATTT TAACCACCCA TTAGCAGGGC GAGAAATTAC CTTTGAAGTT
GAGATAGTCT CCGTAAAGCC GGCGACGACT CACTAA
 
Protein sequence
MTNDVLAVGA GMEVTLHFAL TLEDGAVVDS NFESKPATFV VGDGKLLPGF EQAIFGLIAG 
DKKAMHIPPE QGFGQPNPNN IQEVKRKVFA ADMELAQGLV VSFADANGGE MPGVIAEIGE
EIVKVDFNHP LAGREITFEV EIVSVKPATT H