| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2557 |
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| Symbol | |
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| ID | 3968723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3244083 |
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| End bp | 3244520 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921655 |
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| Product | peptidase M50, putative membrane-associated zinc metallopeptidase |
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| Protein accession | YP_528029 |
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| Protein GI | 90022202 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0530742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAAATT ATAGGAATGT TTCAGCTGGC TTTACCTTGA TTGAAGCAAT TGTTGTTGTG
GCGATTGTTG GAATTATATC AGCGTTCGCT ATTTCTACTT ATTCTGGTTC AGTAGAAAAA
ACTCGACGAG CGGATGGCAA AGCGGCGGTA CTACGTGCAG CAGCAGCGCA AGAAAAGTGG
TACGCACAGA ATAACCAATA TTCGGCGGAT ATGTCGGTGC TGGGTGGGGC TACTTCGAGC
GAGGGGTATT ACACATTAAC AGCGGCCAAC ACTTTAAACG GTGTAGCCTG TGCGACTAGA
ACGTGCTTTA CCATCACCGC TACAGCTACT GGTGCCCAAG TGAGTGATAC CGAATGTGGC
ATTTTAACGG TTGATAATAT TGGCCGTAAG CGTTCCTATC GGCTTGGCAC AACCACAGAA
ACACAAAACT GTTGGTAA
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| Protein sequence | MRNYRNVSAG FTLIEAIVVV AIVGIISAFA ISTYSGSVEK TRRADGKAAV LRAAAAQEKW
YAQNNQYSAD MSVLGGATSS EGYYTLTAAN TLNGVACATR TCFTITATAT GAQVSDTECG
ILTVDNIGRK RSYRLGTTTE TQNCW
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