| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2541 |
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| Symbol | |
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| ID | 3968741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3218746 |
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| End bp | 3221298 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921639 |
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| Product | hypothetical protein |
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| Protein accession | YP_528013 |
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| Protein GI | 90022186 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.241024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000170859 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACACAA AAATAAAATT ACTTTCATTT CTTGCGAGTG CAATGCTGTT GCAGGCATGT
GGTGGTGACA TGCTGGGCAC CTCTGACAGC GAAGACTATA AATTGATTCC AGAAGAAGTA
ACGGAAGATC CAACTAAAGC TAGGCCGTCT GAAAATGCCC CCGTGTTAAA AACGAGTGGT
ACTACTATAC AGCTACCAGA TGGTACACCA GTGCTGCTGC GAGGTATTAA CCTTCAATTT
GGCGACAATC CTATTGAGCA AATAGATGGC ATACAGGCTA TTCGCGAAAC AGGTTCAAAC
GTTGTGCGAA TTCAATTGTT AGCAGATACA TCTACAGCAA ATTTAGAGGC GGTGCTAAAT
AAAGTTGTTG AGCATAATTT AATAGCTGTA CTTAGTCTCT ACGACGAAGC TTTACATTGT
AAAGAAGATG ATGAGGCATT TACGGATGCA GTTAAGCAAG TATGGCTTAC CGATTTTCTT
CCAATTATTG CTCAAGATCG TTATCAAGCA AATATTATGA TTAACATCGC AAGTGGCTGG
GGGCCTGAAG CCATTTTTGA TGGGTATAGT GTAGGTTACA AAACGTATAC CGATAACTAT
AAAGCAGCTA TTCGTCAGTT CCGAAAGGCT GGGTTTAATG TGCCTTTGGT AATTGATGCC
CCTGGATGTG GTGCTGACTT TAACGCTTTT TTAAGTAATC GCGGTAAAGA GCTTATGGCT
GCGGATGATA AAGACAATCT TGTGTTGTCC GTGCACGGTT ATGGTTCGCA GTGGAACACG
GCTACTAAAG TTACGGATGC AATTAGCCAG CTTGCTGCGC AAAATATCCC TGTGCTAATG
AGCGAGTTTG GTGGCTCTGG TGTCGGTGAA AAGCCTGTTA AACATATGGC GATCCTTGAT
AAAGGTGCAG GAGATTACGC CGCAGAAATT ATTCTGCCAT GGGCGAGCGC TACAGATAAA
GTGGCTATGA ATGTGCCATT CTCAGCACCT ATCAATCTGA CAAACACTGA TGTGAGCTTT
GACGTTAAGC TGGATGAAGC ATATGTCACG GATGGTCAAA TGGGGGTTGT AATGTACCTC
CGAGATGTAA ATGGAGAATA TGCAAACTTA GCTTGGCACT CTGCCTCTGA ATTTCCGGCT
GGTGAATGGG CTACTAAATC TTATGCGATT CAGAATAATG CATCTTTCGG CTGGGCAAGT
GAGGCGTTTG ATATTACTGC CGTCGCTAAA GTTGGTGTTG AGTTGGTTGC AAATGGCAAG
CTCGCCGAGG TTGCTGGCAG CGTTGTTATC GACAACCTTC GAGTGGCTGA AGGTAGTGGT
GCAGTCGAGT TATACAGTCA AAGCTTTGAT GATGATATTG CAGGTTGGGG CGTGCCTTGG
ACTGGCACAG TTGCTGCGCA CGCTGACGGT GCTTTATCGC TAACCCATGA CAATGGAGAA
ATTATTGCCC AGCTGGACGG GCTTGGTGGT GTAGTTGATT TTGCCCAGCC GGTTGTTATT
AGTGGCAGGT TTTTTGTGCC TGCGGATTAT GCTGGTTCAT GGATGTACGC TAAATTTTTC
AATAACGGCG AGGCATGGAC AGAGGTTGGA ATTACTGGGC TTACTCCTGG AGAGTGGACA
GAAATTTCCG TCGAAACCGA ATTTCCTGCA GCTGCTACCA GTGTAGGCAT TCAGATTGGC
AACATAGGTA TTGCTGATGG GGCAACCATT ACAGATTCCA CAGAGCCTTT TTTGCTGGAC
GACTTTGCTA TAAGTGGCGT AGCAGCTAAT GACTCGTTCG AACTTGGTAC GCAGTATATG
GCGTCGTTCG ATGAATCTGA AGATGGCTGG GCTTACTTGA GTTGGGGGGC GTCTGCTACT
GTAGAGGCCA TTGATGGCGC TTTGAATTTC TATCCAAATG CCAATGATGC GGTGAGAATA
GTACTTTATA AAACCGACTT AAGTGCTATA GACGACTTGG ATTTGCAGGA CCCGTTCACC
ATTAAAACGC GAGTATTGAT TCCAGATAGC TACACAGGAC AGGCGTTCGA GTATCAGCTG
TTTCTACAAG ATGCTAACTG GCAAAATCAT TTTGCAGCGA AAATTTGGAA CCAAGATGAG
CTTATCCCTG GTGAGTGGAT GGACTTGGTG GTTGAGGTTG AGTTTCCTGC TGAATTCGAT
CGGGCTGGAA TTCCTCAATA CCTCGGTTTT GACCTGTCCT CCGAAGTTGC TTTACCACAA
GACCCAATAC TAATTGATGA AATAGTTTTT GAAGGCATGG TTCCAGTAGA AAAAGAAGTT
GTGATCATTG ATCAGGTAGA TTTCTTCTAC ACTAACCACT TTACAGATTT TGCTATCGAC
TATATTGAGG GTGAAATATT AGAGGACGAC ATTCTGGAGC TTGCTTATAT TCATCAGCGC
AGCGAGCCAT TCTCTTGGAT AGCTTGGTCT TGGTACGGAA ATGATATCGA AAATTCTGAC
TGGGATATGA CCACCATAGT TGGCGACGCA ACAGCCTTGA CTGAACGTGG TGAAGATATC
GTAAATGGTA AAGGTGGGAT TGCAGGTAAC TAG
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| Protein sequence | MNTKIKLLSF LASAMLLQAC GGDMLGTSDS EDYKLIPEEV TEDPTKARPS ENAPVLKTSG
TTIQLPDGTP VLLRGINLQF GDNPIEQIDG IQAIRETGSN VVRIQLLADT STANLEAVLN
KVVEHNLIAV LSLYDEALHC KEDDEAFTDA VKQVWLTDFL PIIAQDRYQA NIMINIASGW
GPEAIFDGYS VGYKTYTDNY KAAIRQFRKA GFNVPLVIDA PGCGADFNAF LSNRGKELMA
ADDKDNLVLS VHGYGSQWNT ATKVTDAISQ LAAQNIPVLM SEFGGSGVGE KPVKHMAILD
KGAGDYAAEI ILPWASATDK VAMNVPFSAP INLTNTDVSF DVKLDEAYVT DGQMGVVMYL
RDVNGEYANL AWHSASEFPA GEWATKSYAI QNNASFGWAS EAFDITAVAK VGVELVANGK
LAEVAGSVVI DNLRVAEGSG AVELYSQSFD DDIAGWGVPW TGTVAAHADG ALSLTHDNGE
IIAQLDGLGG VVDFAQPVVI SGRFFVPADY AGSWMYAKFF NNGEAWTEVG ITGLTPGEWT
EISVETEFPA AATSVGIQIG NIGIADGATI TDSTEPFLLD DFAISGVAAN DSFELGTQYM
ASFDESEDGW AYLSWGASAT VEAIDGALNF YPNANDAVRI VLYKTDLSAI DDLDLQDPFT
IKTRVLIPDS YTGQAFEYQL FLQDANWQNH FAAKIWNQDE LIPGEWMDLV VEVEFPAEFD
RAGIPQYLGF DLSSEVALPQ DPILIDEIVF EGMVPVEKEV VIIDQVDFFY TNHFTDFAID
YIEGEILEDD ILELAYIHQR SEPFSWIAWS WYGNDIENSD WDMTTIVGDA TALTERGEDI
VNGKGGIAGN
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