| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2537 |
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| Symbol | |
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| ID | 3968732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3207732 |
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| End bp | 3209102 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637921630 |
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| Product | hypothetical protein |
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| Protein accession | YP_528009 |
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| Protein GI | 90022182 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.220084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAA CAATTAGAGC AAAGCTATTT CTTAGTCATT TTTTCGCCAT AATGTTCGTT
TCGGGGAGTA TTGGTTCCTA CTTCTATGGG AGCGCAATCG AAAATTTAGA GAACAGCTTA
AAGTCTAGGC TGCGTAATAG TGCAGCATTG CTTTCAAAAA GCTTTGATAC GAAAGAGTTA
GATCTCATAC AAAACGAGCA AAATAAGTCG TTACCAGAGT ATGAGAAAAA TTTGCAGTTA
ATTATCAGCT ATGCTTCTTC AAATGATGAT ATAGCTTTTA TCTATATTAT GCGTTTGCGA
GACGGGCTGG TTGAGTTTGT ACTAGATTCC GATCAAGTTA ACCCTGCCAG ACCTGGCGAA
ATATATAAAC AAAATATTCC TGAGTTAATT GAAGGCTTTG CGAGTGTTAG TGTGGATTCA
TCCATCACTA CCGATCGCTG GGGTAGTTTT ATGTCTGGTT ACGCGCCTAT TGGTGGCGGG
GCAGCCCAGT ATTTAATCGG TTTAGATATG AAAGCCGACG ACGTTAGCAA TAAATTGCAG
GATCTAAAAA CAAAGGGTTT ACTTTCGTTA TTAATGTCGC TAATCCTAGC TTATGCCTGC
TGTTATTACT TATCTCGTAA TTTTGTCTAT CGCATCCGCC GCTTACATGA TCAATGCGGA
GACCTTATTC ATGCAGATCC AAAAGACGTA AGCGTTAAAG GGGATGAGAT TGACGATTTA
AGTGATGTGT TTAGTGTAAT GCTAGAGTCG TTCCAAAAGA ATCAAGAAAT ACTCGAAGCT
AAGGTGACTG AGCGCACTGA AGAGGTTAAT AAAGCAAACC GAAACTTAAT GATTGAAGTG
AAAGCGCGCA AACAAATGAT GGAGCAATTG CGTGACTTGG CTAGAACTGA TTACTTGACA
ACGCTTATCA ATCGTCGGGA AATGACCAAT ATTTTAAGAA GTGTATGCAT AGATTACAAA
GTACACCCTA AGCCGTTTGT CGTAACTTTA ATGGATATTG ATGATTTTAA AAATATTAAT
GATTGTTACG GTAATGGAGT TGGGGACGAA GTGTTGCTTT CGCTTTGTAA GCGTTTAAGT
GCAATGCTCG ATACGAAGGA GGTTCTTGCT CGTTGGGGGG GAGAAGAATT ATTGTTTTTG
ATGAACGACG CCACCTTAAC TGATGCCGCA TTGCGAGCGG AGGCATTGCG AAAAACCATC
GAAGGCATGG AATTTTCTGT GGATAACAAT ATAGTTTCCA TCACTGCTAG TTTTGGCTTG
GCAGAATACG AAGTTGAGCG CGGTTTAGAT GCCACTATAA AAGAGGCGGG CTTGGCTTTG
TATCGTGCTA AACGTTTAGG TAAGAATCGG GTGTCAATCG AGGATTCTTA G
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| Protein sequence | MKLTIRAKLF LSHFFAIMFV SGSIGSYFYG SAIENLENSL KSRLRNSAAL LSKSFDTKEL
DLIQNEQNKS LPEYEKNLQL IISYASSNDD IAFIYIMRLR DGLVEFVLDS DQVNPARPGE
IYKQNIPELI EGFASVSVDS SITTDRWGSF MSGYAPIGGG AAQYLIGLDM KADDVSNKLQ
DLKTKGLLSL LMSLILAYAC CYYLSRNFVY RIRRLHDQCG DLIHADPKDV SVKGDEIDDL
SDVFSVMLES FQKNQEILEA KVTERTEEVN KANRNLMIEV KARKQMMEQL RDLARTDYLT
TLINRREMTN ILRSVCIDYK VHPKPFVVTL MDIDDFKNIN DCYGNGVGDE VLLSLCKRLS
AMLDTKEVLA RWGGEELLFL MNDATLTDAA LRAEALRKTI EGMEFSVDNN IVSITASFGL
AEYEVERGLD ATIKEAGLAL YRAKRLGKNR VSIEDS
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