| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2532 |
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| Symbol | |
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| ID | 3968759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3203887 |
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| End bp | 3204582 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921625 |
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| Product | peptidase A8, signal peptidase II |
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| Protein accession | YP_528004 |
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| Protein GI | 90022177 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00489789 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.411252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAAA ACTCACTGTC TATCTGGAGC TTAATTGTTC AGGCGAGCGT GCTTGTACAA
ATAGTGATGG CGATTCTATT TTTGCTATCG GTAGTTTCTT GGGGGTTGAT TGTTCAACGC
GGTTTATACC AATACCACGC TAAGGTAGCT TACAAAGACT TCGAGCGGCA GTTTTGGTCC
GGTGTGGATT TAACCCAGCT GTATAGGCAG GGCAATAGCA AGGCCAACCG AAGTGCAACC
GATGGTGTAG AGAATATATT CCGCGCTGGT TTCAAAGAGT TTACTCGTTT GCGGCAGCAG
GGCAGCACAG ACCCCGATGC AATTATGGAA GGCACACAAC GCACAATGCG CGTAGCTATG
GCTCGAGAGG AAGAAAAACT AGAAGTGTTT TTGCCTTTTT TAGCCAGCGT AGCGTCAGTG
AGCCCTTATA TTGGTCTGTT TGGTACGGTT TGGGGCATTA TGAACTCGTT TCGCGGCTTG
GCTACAGAGT CTCAAGCTAC GTTGGCGTTG GTTGCTCCTG GTATTTCCGA AGCGCTTGTG
GCGACGGCAA TGGGCTTATT CGCAGCAATT CCTGCGGTAC TGGCTTACAA CCGTTTTTCG
TCGAATGCTG AATCGCTTAT TAGTCGTTAC GAAACTTTTG CCGAAGAGTT CTCTGCTATT
TTGCACCGCC AAGTTCACTC TAAAAGCGCC GAGTAA
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| Protein sequence | MTENSLSIWS LIVQASVLVQ IVMAILFLLS VVSWGLIVQR GLYQYHAKVA YKDFERQFWS
GVDLTQLYRQ GNSKANRSAT DGVENIFRAG FKEFTRLRQQ GSTDPDAIME GTQRTMRVAM
AREEEKLEVF LPFLASVASV SPYIGLFGTV WGIMNSFRGL ATESQATLAL VAPGISEALV
ATAMGLFAAI PAVLAYNRFS SNAESLISRY ETFAEEFSAI LHRQVHSKSA E
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