| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2531 |
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| Symbol | |
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| ID | 3968758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3203452 |
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| End bp | 3203880 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921624 |
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| Product | biopolymer transport protein |
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| Protein accession | YP_528003 |
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| Protein GI | 90022176 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0000400528 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.955868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGCAA AAGGTAAAGG CAAAAGAAAA CCGTTAGCGG AAATCAACGT CGTTCCCTAC
ATCGATGTGA TGTTGGTGTT ATTGGTTGTG TTTATGGTGA CGGCTCCACT GCTCATGCAA
GGGGTGAAGG TAGATTTACC GCAGTCTCCG TCTGCACCGA TCGATCAAAA AGACGAAGAG
CCTATTATTG TTTCTATCAA AAAAGATGGT ACCTACTACA TTAATTTGGG AGGCGATCAA
GAAACTCGCC GCGAGCTGAA AGACATAACC ACCATCGTTG CGAAAGTGCT TAGAGAAAAA
CCCAATACGC CAATACTAGT ATGGGGCGAC GCCAAGGTAG AGTACGGTGC AGTTGTGAGT
TTGATGAGCG ATCTTCAGGG CGCCGGTGCT CCCTCTGTAG GCTTAGTTAC CGAGCCTCCA
CGCTCTTAG
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| Protein sequence | MAAKGKGKRK PLAEINVVPY IDVMLVLLVV FMVTAPLLMQ GVKVDLPQSP SAPIDQKDEE
PIIVSIKKDG TYYINLGGDQ ETRRELKDIT TIVAKVLREK PNTPILVWGD AKVEYGAVVS
LMSDLQGAGA PSVGLVTEPP RS
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